| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0868 |
|---|
| Symbol | |
|---|
| ID | 8383141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 835757 |
|---|
| End bp | 836548 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644971932 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003129784 |
|---|
| Protein GI | 257051951 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGATC AATTTGAAGA CAAGGCAGTT ATCGTCACTG GCGCGTCCTC GGGGCTCGGG
CGCGCGATCG CGAAACGCTT CGGGGAAGCC GGCGCGAACG TCACGAACGC GGACATCCAG
CCGGACCCCC AGACCGGGGG GACGCCGACC CACGAGGCCA TCAACGAGGC GGACAACGAC
GGCGAGGCCA AGTACGTCGA GACCGACGTC TCCTCGAAGG AGGATGTCCA GGTCGCCGTC
GACGCCACCG TCTCCGAGTA CGGCTCACTC GACGTGATGG TCAACAACGC CGGCGTCACC
AAGATCGCCC CCGCCGAGGA GATGGACTTA GACGACTGGC GGTGGGTCAT CGACGTCAAC
CTCACGGGCG TGTTCATCGG CAGCCAGATC GCGGGCCAGC AGATGCTCGA ACAGGAGGAT
GGCGGGTCGA TCGTCAACAT GGCGTCGATG ATGGGCGAGA TGGGGCTCCA GAAGCGCTCG
CCGTACTGCG CCGCCAAGGG CGGCGTCATC AACCTCACCC GCACCCTCGC CGTCGAGTGG
GCGCCCGAAG ACATCTACGT CAACGCCCTG GCTCCCGGTT ATATCTACAC TGATATCACG
GAACAGACCC AGGACTCTGC CGATTACTCC AACGAGGACA TCCGCCGACG GACGCCGGTC
GGTCGCTACG GGACGCCCGA GGAGATGGCC GAGAACATCC TCTTCCTTGC TCGTGACGAT
CACTTCGTCA CTGGCGAAGT TCTCCACGCC GACGGCGGCT GGAGCGCGGA CGGTTGGGGC
TACCGGGAGT AA
|
|---|
| Protein sequence | MTDQFEDKAV IVTGASSGLG RAIAKRFGEA GANVTNADIQ PDPQTGGTPT HEAINEADND
GEAKYVETDV SSKEDVQVAV DATVSEYGSL DVMVNNAGVT KIAPAEEMDL DDWRWVIDVN
LTGVFIGSQI AGQQMLEQED GGSIVNMASM MGEMGLQKRS PYCAAKGGVI NLTRTLAVEW
APEDIYVNAL APGYIYTDIT EQTQDSADYS NEDIRRRTPV GRYGTPEEMA ENILFLARDD
HFVTGEVLHA DGGWSADGWG YRE
|
|---|
| |