Gene Huta_0684 details

Gene Information

• Locus tag: Huta_0684
• ID: 8382953
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 674973
• End bp: 675638
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 644971747
• Product: transcriptional activator, TenA family
• Protein accession: YP_003129603
• Protein GI: 257051770
• COG category: [K] Transcription
• COG ID: [COG0819] Putative transcription activator

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.453288
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCTTCA CCGACGATCT GGAACCGACT GCCGAGCAGT ACTGGGACGC CATCGTCGAC 
CATCCCATGG TGGCCCAGCT GGGCGAGGGG ACGCTGGATC CCGAGCCCTT CAAACACTGG 
GTCCGCCAGG ACTACGTCTA CCTGATCGAG TACGGGCGCG TGTTCGCGCT TGGGGCCGGG 
ACGGCCCCCT CGCTCGCCCG GATGGGGCGC TTCGCCGAGT TGCTCGACGC GACGATCAAC 
ACCGAGATGG ATCTCCACCG CGAGTACGCC GCCGAGTTCG GGATCAGCGA GGCGGAACTC 
GAAGCGACCG AGCCATCGCC GACCACTCGG GGGTACACGG ACTTTCTGGT GCGGACGGCC 
GCCGTCGGGA CGTTCGGCGA CACCGTGGCC GCGCTGTTGC CCTGTATGTG GGGCTTCAAC 
GAGACTGCAA CGCGACTGGA CGCACAAGGC CGGCCGGACG ATGATCGGTA CGCCGAGTGG 
ATCGACACCT ACGCCGGCGA GGAGTTCACT GAACTCACCG AGTGGTGTCT GGACCTGATG 
GACGCCGTCG CCGCTGAATC GAGTGCCGAG GACCGGGAAC GCTATCGGGA GCTGTTCGAG 
ACCTCGGCGC GCTACGAGTA TCGCTTCTGG GACGCCGCCT GGCGGCAGGA GGCGTGGTCG 
ATATGA 

 

Protein sequence

MSFTDDLEPT AEQYWDAIVD HPMVAQLGEG TLDPEPFKHW VRQDYVYLIE YGRVFALGAG 
TAPSLARMGR FAELLDATIN TEMDLHREYA AEFGISEAEL EATEPSPTTR GYTDFLVRTA 
AVGTFGDTVA ALLPCMWGFN ETATRLDAQG RPDDDRYAEW IDTYAGEEFT ELTEWCLDLM 
DAVAAESSAE DRERYRELFE TSARYEYRFW DAAWRQEAWS I