| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0476 |
|---|
| Symbol | |
|---|
| ID | 8382743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 473566 |
|---|
| End bp | 474147 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644971538 |
|---|
| Product | hexapaptide repeat-containing transferase |
|---|
| Protein accession | YP_003129396 |
|---|
| Protein GI | 257051563 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.269907 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCG CGAAAGTCGG TGACGACATC CATACCGACG CGCAGACGAC TGTTGGCTAC
GAGTACGACG AGGACGCCAG CCCGGCGATC ATCGGGGAAG ACGCGACGAT CCGGAAAGGA
ACGATGGTGT ACTGTGACGT CGAGATCGGC TCCGGCTTTA CGACTGGCCA CGATGCGCTC
GTCCGCGAAC AGACGACGAT CGGGGACGAC GTTATCCTCG GGACGAAGTC AGTTCTCGAC
GGTCACGTGA CAGTTGGATC GGATGTGAGT ATTCAGACTG GAGTGTACGT TCCGCCGGGG
AGCGAGATCG GAGACCGTGT CTTTCTGGGA CCGAACGCCG TCCTGACTAA CGACCCCTAT
CCGCTCCGTG TCGATGTCGA CCTGGATGGG CCGACGCTCG GCGACGACGT CTCGGTCGGG
GCGAACGCGA CGATCTTGCC CGGAGTCACC ATCGGAGACG GTGCCTTTGT CGCCGCTGGG
GCCGTCGTTA CGCAGGACGT TCCACCGCGT CGTCTCGCCG TCGGCGTTCC CGCCGAAATC
AAACCGCTGC CGGAGGAACT CAGCGGGGGG AACGTCGCGT GA
|
|---|
| Protein sequence | MTRAKVGDDI HTDAQTTVGY EYDEDASPAI IGEDATIRKG TMVYCDVEIG SGFTTGHDAL
VREQTTIGDD VILGTKSVLD GHVTVGSDVS IQTGVYVPPG SEIGDRVFLG PNAVLTNDPY
PLRVDVDLDG PTLGDDVSVG ANATILPGVT IGDGAFVAAG AVVTQDVPPR RLAVGVPAEI
KPLPEELSGG NVA
|
|---|
| |