| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0421 |
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| Symbol | |
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| ID | 8382688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 414632 |
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| End bp | 416323 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644971483 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003129341 |
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| Protein GI | 257051508 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.410196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGCTA TCTATCTGGC AGTTGTCCTC TTCGCCGGCA TCATCGGCAC TGGTGTCGCG
ATGTACGCGC TGGTGCACCG CGAAACGCCA GGTGCCGGAC CCCTCGCTCT CCTGTTGCTC
GGCGCAGCGA TGTGGTCGTT TACCGAAGGA CTCAGTATTG CCGCCGGCAG CGCGGCGAGT
ACGCTATTCT GGGCCAAGCT ACGGCTGTCC ATCACGACGA TCATCCCGAT CTCCTGGCTG
TTATTGACAG TCGAATACAC CGGGCGCGAC CGGTATTTGA GTGTGCGTCA ACTGGGTGCG
CTCCTGATCG AACCGATCGC GTTCGTTTTG CTCGTCTGGA CGAACCCCCA TCAGGTGGTG
TTGCGCTCTG TTGATATCGT CTTTGCCGGC GGTGGGACAG GGGTGTTCGC GACACGGGGC
CTCGCATACT GGGCACACGT GAGCTATTCG CACCTCCTGA TTGCATTGGG GGCATTTCTG
CTCGTCAGAT TGTCGCTCCG TACGGATTCA CTCTTTCGGG CCCAGAGTAC GGCTCTCCTC
GCATCGATCA CCGTCCCGGT GGTCGCTCAG GCCGCGTTTC TCTTTCGGTT CGTGCCCCGC
GGCATCGACC CAACGGGGGT TGCCTTCGTC GCGACCGGCG CGATTCTCAC CGTGGCGATC
TTACGCCGAC AGTTACTCGC TGTCGCCGCC GGGACACGGG AACACGGCCG CGACGAAATC
CTGTCCGAAC TCGAGGATCT CGTGTTCATG GTTGACGAAG CAGGGTTTGT CGCCGATTGT
AATCAGGCAG CCCTCGAGAC GCTGGACACG ACGGCTGACG ATGTGATCGG TCGGCCCCTC
GAGACTGTCG CGCCGACGCT CGCCGACACA CTCCCCGACG GAGCGATCGA GTATCATCGC
GTCGTGCCCC TCGAACTTGA CGGGACTGTT CGAAAGTACG ACGTTCAGCA GTCGCTCATC
GAACGCCCGT TCGGCGATGT GGAGACGCGA ATCCTTAGTC TCCGGGACGT CACTGATCAG
ACCCGTCGAG AACAGCAACT CGACGTACTC AACCGGTTGT TACGTCACAA TCTGCGCAAC
GAGATGAACG TGATACGGGG TCACGCCGAG TTACTTGCCG AAGTGGTCGA TGGACCGGCG
GTCCAGCGCC ACGTCGAGAC GATCATGGGC ACCGTCGACA CAGTCACCGA CCGTAGCGAC
AAGGTCGGGA CGCTGACCCG GGCCTTCGAC GCTGAGGGTG CACAATCGGT CGACCTCGAA
CTCACACTTC GCGACGCGAT CGGGACGATC CAGGGAGCAC ACCCGTCGGC ACACATTCAG
TTCGACCCCG CAGCTGCGAG TGGGATCCGG GTCAACAGTG GGGCCTCGAT CGGTCTCGCG
TTCGAGGAAC TGCTGCACAA CGCCATCGAG CACAACGATG CCGATCCAAC GGTCCGGGTC
AATGTCGAGG CTGACGCTCA TGACTCCGGG GTGACGGTTC GGATCGCTGA CGACGGCCCT
GGGATCGGCG AGCAAGAGCG TACCGTCATC GAACGTGGCA GTGAGACGCC CCTCGAACAC
AGCAGCGGGA TCGGCCTCTG GCTCGTCGCC TGGATCGTCC GGACCGTTGG AGGGACGATC
ACCTTCGAAA TCACTGACGA AGGGACGACT GTCGTCGTTC GGCTCCCCCG CGGTGACGAT
AGTTCCAAGT AG
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| Protein sequence | MAAIYLAVVL FAGIIGTGVA MYALVHRETP GAGPLALLLL GAAMWSFTEG LSIAAGSAAS
TLFWAKLRLS ITTIIPISWL LLTVEYTGRD RYLSVRQLGA LLIEPIAFVL LVWTNPHQVV
LRSVDIVFAG GGTGVFATRG LAYWAHVSYS HLLIALGAFL LVRLSLRTDS LFRAQSTALL
ASITVPVVAQ AAFLFRFVPR GIDPTGVAFV ATGAILTVAI LRRQLLAVAA GTREHGRDEI
LSELEDLVFM VDEAGFVADC NQAALETLDT TADDVIGRPL ETVAPTLADT LPDGAIEYHR
VVPLELDGTV RKYDVQQSLI ERPFGDVETR ILSLRDVTDQ TRREQQLDVL NRLLRHNLRN
EMNVIRGHAE LLAEVVDGPA VQRHVETIMG TVDTVTDRSD KVGTLTRAFD AEGAQSVDLE
LTLRDAIGTI QGAHPSAHIQ FDPAAASGIR VNSGASIGLA FEELLHNAIE HNDADPTVRV
NVEADAHDSG VTVRIADDGP GIGEQERTVI ERGSETPLEH SSGIGLWLVA WIVRTVGGTI
TFEITDEGTT VVVRLPRGDD SSK
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