Gene Huta_0394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0394 
Symbol 
ID8382659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand- 
Start bp387420 
End bp388373 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content65% 
IMG OID644971454 
Product1,4-dihydroxy-2-naphthoate octaprenyltransferase 
Protein accessionYP_003129314 
Protein GI257051481 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 
TIGRFAM ID[TIGR00751] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.859929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGGC CAGCGGCAGA CGTCTCCAAG CGGAAAGCGT GGGTGATGGC CGCCAGACCG 
CACACGCTCC CGGCCGGGAC CGCGCCGGTC ATCGTTGGTG TTGGCGTCGC CGTCCACGAC 
GGCGTCTTCG CTCTTTTCCC GACGCTCGCG GCGCTGGTCG GCGCACTCCT GATCCAGATC 
GGGACCAACT TCGCCAACGA CTACTTCGAC GCCGTGAAGG GGGCCGATAC GGACGAACGC 
GAGGGCTTCA CCCGCGTCAC TGCAAGCGGG TTGATCGAAC CCGACGAGGT CAAGCGCGCA 
ATAATCGTCA CGTACGGGCT GGCGATCGGC GTCGGGCTGT ATCTCGTAGC GATCGGCGGC 
GTGCCGATCC TCTTCGTGGG GCTCTCCGGG ATCGCCGCCG GCATCCTCTA CACCGGGGGG 
CCGTATCCCT ACGGCTACTA CGGGCTTGGC GATCTGTTCG TGTTCGTCTA CTTCGGCGTC 
TTTGCCGTGG TCGGGACATA CTACGTCCAG GCAGCGTCGA CGATGGCCGA CCTGTTCCCG 
CTGTGGGTGC CGAGCGGGAC GGTCAGCCTC GCGGTCGTCG TCGCGAGCCT CCCGGCCGCG 
ACGCTCTCGA CTGCCATTTT GAACGTGAAC AACATCCGCG ACATCGAGAC GGATCGCAAG 
GCCGGCAAGC GCACGCTCGC TGTCATCCTG GGCGACCGAC TGAGTCGCCT CGAATACGTT 
TTCATGATCG GGACGGCGTA CGTTGTCCCG GTCGTCTTCG CATTCGATTC CGACTTCGGA 
TTGCCGGCGT TGCTCCCGCT ATTGACGCTT CCACTTGCGG TATCGGTGAC GTTGACTGTG 
CTGACTGAAT CGGGGGGCGA CGTCCTCGAT CCAGCACTCG AACGGACCGG CCAGGTGATG 
GTTGCCCACG CCGTGCTGTT CGCGGTCGGA CTCGCCCTGC CGCAGGTGAT CTGA
 
Protein sequence
MSRPAADVSK RKAWVMAARP HTLPAGTAPV IVGVGVAVHD GVFALFPTLA ALVGALLIQI 
GTNFANDYFD AVKGADTDER EGFTRVTASG LIEPDEVKRA IIVTYGLAIG VGLYLVAIGG 
VPILFVGLSG IAAGILYTGG PYPYGYYGLG DLFVFVYFGV FAVVGTYYVQ AASTMADLFP 
LWVPSGTVSL AVVVASLPAA TLSTAILNVN NIRDIETDRK AGKRTLAVIL GDRLSRLEYV 
FMIGTAYVVP VVFAFDSDFG LPALLPLLTL PLAVSVTLTV LTESGGDVLD PALERTGQVM 
VAHAVLFAVG LALPQVI