Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_0360 |
Symbol | |
ID | 8382624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 349211 |
End bp | 349756 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644971419 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003129280 |
Protein GI | 257051447 |
COG category | [K] Transcription |
COG ID | [COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 |
TIGRFAM ID | [TIGR00270] conserved hypothetical protein TIGR00270 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTTCAAT GTGAGATGTG CGGGGCCGAG ACGGCTGCGC CGAACACCGT CAAGGTGGAG GGTGCGGAGT TGGACGTCTG TGATGAGTGT GCCGACTTCG GCACGGAAGT GCGGACCCAG GAGTCCTCGA GTGCGTCCAC GAAGTACTCG ACGGATTCGT CGGGTTCGTC CAGTTCCAGC AGTTCGGGCT CGGCCAGCGG TGGCGGTGGG TCCGGGGGGT CCTCCGGGGG CGGTAGCCGT CGAGACATGT TTGACGAGAT GGACGAACTC GTCCAGGACT TCGATCAGCG GATCCGATCG GCCCGTGAAG CAGCCGACAT GAGCCAGGAA GAACTCGCTG ATCAACTCAA CGAGAAAGCC AGCCTCATTC GAAAATTGGA GCACGGTGAC CATCTCCCGA GCGACGACGT CCAGCAAAAG CTCGAACGTG CTCTGGACAT CGAACTCACA GAGAGCGGCG GCACGGACGA TGATGCTGAC TGGGACAGTG GCTCGGCAGT CGGCGAGTAC ACGCTCGGTG ACGTCGTCGA ACGAAAGGAT TCCTGA
|
Protein sequence | MVQCEMCGAE TAAPNTVKVE GAELDVCDEC ADFGTEVRTQ ESSSASTKYS TDSSGSSSSS SSGSASGGGG SGGSSGGGSR RDMFDEMDEL VQDFDQRIRS AREAADMSQE ELADQLNEKA SLIRKLEHGD HLPSDDVQQK LERALDIELT ESGGTDDDAD WDSGSAVGEY TLGDVVERKD S
|
| |