Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_0353 |
Symbol | |
ID | 8382617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 339980 |
End bp | 341608 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644971412 |
Product | TrkA-N domain protein |
Protein accession | YP_003129273 |
Protein GI | 257051440 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCGTC GACGGCGCGC GTATTATTAT CTCGGTGCCT TCGCCGCCGT GACAATCCTC TATACGATCG CCTACGGGGC CGGCATGGCG GTCTTCGAAA GCGCCTCCCG GACGTTGACC GAGTCGCTGC TGGTGGTCGT CCAGTCCTTT ACCACGACTG GCTACGGCGA GGACGCGGCC GCCTGGACCA CTCCCCAGAT GCGGCTGCTC GCGATCGCGA TGCAGGTGAC CGGCGTCTTC TTCGTGTTCA TGGCCCTGCC GCTGTTCGTC GCGCCCTGGA TCGAACAGCG ACTGACGACG ACTGTCCCCG ATTCGATCGA GGACGCCGAC GATCACGTCG TCATCTGCGG GTACACCCCG CGAACGGAGA TGCTGATCGA CGAGTTGCGG ATGCTCGAGG AATCGTACGT CGTCATCGAA CCGGACCGAG ACACCGCGAC CGACTATTAC GAAGAGGGAA TCGCGGTCAT GCATGGCGAT CCGGAGTCGA TCGATTCTCT GACCGCTGCG GGCATCGAAG ATGCACGTGC GCTTGTCGCC GATGTCAACG ACGAAGTCAA CGCCTCGATC GCACTCGCCG TCGATCAACT CGCCCCCGAG ACCCGGACGA TCACGTTCGT CGAGGACGCG ACGCTCGCGG ATTACCATCG CTACGCGGGG GCCGATCAAG TCTTCACACC ACGACATCTG ATCGGCGAAA GCCTGGCCCA GAAAGCCACG ACGGCCGTCA CCGACGAGGT CTCCGACGCC GTCGAGATCG GCGATGAGTT AGAGATCGTG GAGATTCCGA TCGAGGCAGG GAGTGACCTC GTCGGGACCA CCATCGGCGA GAGTCGCATC CGCGAGCGAA CCGGCGCGAA CGTCATCGGT GCGTGGTTCC GTGGCCAGTT TGTGAGTTCG CCATCGCCTG CGGATCGGAT CAACGCCCGG ACGGTCCTTT TGGTCGCCGG GCGTGAACCC CAACTCCAGG CCTTTCAGGA GCTTGCCAGC GCGAAGGCAC GGCGACAGCG TCGCGGCCCC GTCCTCATCT GTGGCTACGG CGAAGTGGGA TCGACAGTCA AACAGCGGGT TGTCAGGGCA GGATTGCCGG TGACCGTCAT CGATCTCGAC GAGAAGCCTG GTGTCGATGT CGTCGGCGAT GCGACTGATC CCGACACGTT AGAGAAAGCT GATATCGACG AGGCAAGTTC GGTCGTGCTG GCGCTGCCGG ATGACACGTC GGCGGTGTTC GCCTCGCTCG TCGTCCGACA ACTCGAACCC GACGTCGAAG TGGTCGTCAG GGCCAACGAG ACAGCCAACG TCCAGAAACT CTACCGCGCC GGGGCCGATT ACGTGCTGGC GCTGGCAACC GTCAGCGGTC GAATGCTCGC CTCGACCATC TTCGGCGAGG ACGTCATCAC CTTCGATCAG GGCGTCGAAG TCGTCCGCCT CCCGGTCGGC ACGCTTGCCG GCCAATCGAT CGCATCAGCC GACATCAGGG CCGAGACCGG GTGTACCGTC ATCGCGATCC AGCGAAACGG CGAGCTGATT ACTGACTTCG ATCCGACGTT CACGTTCGAA GACGACGACG AGATAATCGT CACTGGGCCG GACGACCGTG TCAGTGCGTT CACTGCATTA GTCGAGTGA
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Protein sequence | MSRRRRAYYY LGAFAAVTIL YTIAYGAGMA VFESASRTLT ESLLVVVQSF TTTGYGEDAA AWTTPQMRLL AIAMQVTGVF FVFMALPLFV APWIEQRLTT TVPDSIEDAD DHVVICGYTP RTEMLIDELR MLEESYVVIE PDRDTATDYY EEGIAVMHGD PESIDSLTAA GIEDARALVA DVNDEVNASI ALAVDQLAPE TRTITFVEDA TLADYHRYAG ADQVFTPRHL IGESLAQKAT TAVTDEVSDA VEIGDELEIV EIPIEAGSDL VGTTIGESRI RERTGANVIG AWFRGQFVSS PSPADRINAR TVLLVAGREP QLQAFQELAS AKARRQRRGP VLICGYGEVG STVKQRVVRA GLPVTVIDLD EKPGVDVVGD ATDPDTLEKA DIDEASSVVL ALPDDTSAVF ASLVVRQLEP DVEVVVRANE TANVQKLYRA GADYVLALAT VSGRMLASTI FGEDVITFDQ GVEVVRLPVG TLAGQSIASA DIRAETGCTV IAIQRNGELI TDFDPTFTFE DDDEIIVTGP DDRVSAFTAL VE
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