Gene Huta_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0329 
Symbol 
ID8382593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp316554 
End bp317075 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content60% 
IMG OID644971388 
Productarchaemetzincin-like protein 
Protein accessionYP_003129249 
Protein GI257051416 
COG category[R] General function prediction only 
COG ID[COG1913] Predicted Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGTCG ACATCGTGCC GGTCGGTGAT CTCCCCGCGA TGGTCAAACG TGAGGCCTCT 
GCCGGTCTGC GATCAGTCTA CGACTGTGAC GTCACCGTCA ACGACACCCA GTCGATCCCA
GCTGGATCCT TCGATCCTGA TCGCGACCAG TACCGCGCAG AGGAATTCAT CGACCTCGCC
AAGCGAGAGG GGACTGGCGA GAAAAACATC GCGATCACCG ACCGGGACCT GTTCTACCGC
CGCCGCAACT ACGTCTTCGG CCTCGCCTAC CTCGACGGCA ACGGCAGCGT CATCTCGACG
CATCGACTGC AGATGACCTC CGACGGCGGG ATCTCGAACA AGTCCAACAC CGAGGTGTTC
GCCGAACGCG TCCGCAAGGA AGTCGTCCAC GAGATCGGCC ACACGCTCGG GCTCGAACAC
TGTGATAACA AGCGCTGTGT CATGAACTTC TCCCCCAAGG TTCGCCAGGT CGACGTCAAA
GAACAGACCC TCTGTGGGAG CTGTCAACGT CGCATCCTCT GA
 
Protein sequence
MHVDIVPVGD LPAMVKREAS AGLRSVYDCD VTVNDTQSIP AGSFDPDRDQ YRAEEFIDLA 
KREGTGEKNI AITDRDLFYR RRNYVFGLAY LDGNGSVIST HRLQMTSDGG ISNKSNTEVF
AERVRKEVVH EIGHTLGLEH CDNKRCVMNF SPKVRQVDVK EQTLCGSCQR RIL