| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0317 |
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| Symbol | |
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| ID | 8382581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 304624 |
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| End bp | 306666 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644971376 |
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| Product | bacterio-opsin activator |
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| Protein accession | YP_003129237 |
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| Protein GI | 257051404 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.331726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGTT CAGGGGACGG TCGGCGAATA CTCCGGGTTG GGGACGATCC AGGGGCGTCG
CCGGTCTCGA CGGACGGGCT CCGGGAGATG GCGGACAACG TCGTCGTCGA ATCGTCGACC
GACTTCCGTA CGGCAGTCGA ACGGGTCGAA GCCGACGAGG CAGACTGCGT TGTCGTGGAC
CACACCGAGT CGGGATTCGA CGGACTGGCG CTCTTAGAGG CGATCCGTCA GGATCGACCG
GGATTGCCGG TCGTCGTCAT CCCGAGCGTT TCGACGGGGG CCATCGCTCG TCGGGCAGTG
GCCGCCGATG CGACCGCCTA TGTCCCCCAG ACGAGTGATG ACGCCCTCGG TCTCGTGGTC
GAAGCCATCG ACGACGCCGT CCCCGAACCT GATCGTAGGG ACCGACAGGT ACGGATGCCG
ATCAGCGACC GCACGGCGAC CGAACAACAG CGCCTGAAAG AGCGTGCCCT CGATGAAGCC
CCAGTCGGGA TCACGATCGC GGACGCGACG GCACCCGACA AGCCGCTGAT CTACGTCAAC
GACTCCTTCG TGGAGATGAC GGGCTACGAG AAGGAGGACG CGATCGGGGT CAACTGTCGG
TTCCTCCAGG GCGAAGGGAC CGACGCCGAG ACGACCCTGG AACTCCGGGA AGCCGTGATG
GACGAGCAAG CGGCTGCAGT CGAGTTGCGG AACTACCGTG CCGATGGCTC GACCTTCTGG
AACAACCTCG AGATTTCGCC GATCCGGGAC GACGACGGAA CGGTGACTAA CTTCGTGGGG
TTCCAGCAGG ATATCACCGA GCGCAAGGAG GCGGAGGCGG CGATCAAACG TGAGCGGGAG
ACCTTACGGC GGCTGCTGGA GCGCGTCGAG GGGCTCGTCG GCGACGTGAC TGAGATTCTG
GTCAGGGCCG ATTCGCGAGC GGATATCGAC AGAATGACTG TCGAACGGGT CGGGGCCGGC
GACGAATTCG ATCGTGCGTG GATCGGGGAG TACGACCCGC CATCCGAGAC GATCACGATC
ACCGAAGACA GCCACACGGA CACCGAGTCC GTCACGCTCG ATCTCACTGA CGCGGCGGCC
GGATCTGCCA TCGACGTGGT CGCGACGGCC GTGGACCGGG GGGAGGTCCA ACGGTTCGAG
GACGCTGACC TGGAATCCCC CGTCGGTGGA GTGGACGGAT CGACGGTTTC GGACGGGGAC
GGACTGACTG GTTCTGGAGT GGTGATCCCG CTGGTTTATC GAGAGACGAC CTACGGGGTC
CTCGTCGTCT ACGACCGCGA TCCGGACGCC TTCGACGAAA CCGAACGGAC GATACTCGCC
GCTCTCGGTC GGGCGATCGG GTCAGCTGTC AACGCCGTCC TGAGCAAGCG GACCGTGACG
ACCGATGCCA CCGTCGAAAT CACGGTCTCG TTGCACGGGC CGGATCTCCT TTTGGCTACC
CTCGCCGGGC GACTCGATGG TGCCCTCGCG TACCGTGGTG CGCAGGCGAC CGACGACGGG
CGGGTGCGGT TTCTGTTCCA TATCGACGCG GACGACGAGG CCAGCCTCCG CGAGGCGGCC
GAGCGGGACG AACGGGTTTC TGCCGTGACC GTCCTCTCAC GGACGGACGA CGATTGTGTG
ATCGAAATCA CGACCGACGG GACGCCCTTC GTCAGGATCC TGTCCGGATA CGGCGGCGAC
ATCCAGGACA TTTCCGTTGA CGACGACGGG ATCGAACTCG CCTTTCAAGT CGCGACCGAA
CAGAACGGTC GGGCGATCGT CGAGGAACAC CGGTCGACCT ACGAGACAGC GACGCTGGTC
TCCTACACTG AATCCGACGA CCCGGGCGAG ACACCCCAGG CGTTTCGGAG TGCTGTCGAG
TCCGAACTGA CCGACCGGCA GTTGACTGCC CTCGAAAAAG CCTACGTGAG CGGGTTCTTC
GAGTGGCCAC GTGAGAGCGA GGGTGAGGAA CTCGCCGACT CGATGGGAGT CGTTCCCTCA
ACGTATTACC AGCATCTCCG GGCGGCCGAA AAGAAACTCG TCCGGGCTTT TTTCGACTCC
TGA
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| Protein sequence | MSSSGDGRRI LRVGDDPGAS PVSTDGLREM ADNVVVESST DFRTAVERVE ADEADCVVVD
HTESGFDGLA LLEAIRQDRP GLPVVVIPSV STGAIARRAV AADATAYVPQ TSDDALGLVV
EAIDDAVPEP DRRDRQVRMP ISDRTATEQQ RLKERALDEA PVGITIADAT APDKPLIYVN
DSFVEMTGYE KEDAIGVNCR FLQGEGTDAE TTLELREAVM DEQAAAVELR NYRADGSTFW
NNLEISPIRD DDGTVTNFVG FQQDITERKE AEAAIKRERE TLRRLLERVE GLVGDVTEIL
VRADSRADID RMTVERVGAG DEFDRAWIGE YDPPSETITI TEDSHTDTES VTLDLTDAAA
GSAIDVVATA VDRGEVQRFE DADLESPVGG VDGSTVSDGD GLTGSGVVIP LVYRETTYGV
LVVYDRDPDA FDETERTILA ALGRAIGSAV NAVLSKRTVT TDATVEITVS LHGPDLLLAT
LAGRLDGALA YRGAQATDDG RVRFLFHIDA DDEASLREAA ERDERVSAVT VLSRTDDDCV
IEITTDGTPF VRILSGYGGD IQDISVDDDG IELAFQVATE QNGRAIVEEH RSTYETATLV
SYTESDDPGE TPQAFRSAVE SELTDRQLTA LEKAYVSGFF EWPRESEGEE LADSMGVVPS
TYYQHLRAAE KKLVRAFFDS
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