| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0177 |
|---|
| Symbol | |
|---|
| ID | 8382439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 177325 |
|---|
| End bp | 178599 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644971235 |
|---|
| Product | coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein |
|---|
| Protein accession | YP_003129098 |
|---|
| Protein GI | 257051265 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1035] Coenzyme F420-reducing hydrogenase, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACTG AGAAATCACC ACAGCCCCGT GCGCCCGCAG TGGGCGACGA TCCACGGGAA
GCGACGACCG ACGTACAGCC ACCGGACGGA AAAGTGCGCT TTCGCCACCT CGACGAGGCC
GTCATCGAGG CCGATCGGTG TGTGCAGTGT GGCTCGTGTG TTGCCGCCTG CCCCTCGGAC
TCGATCGGGA TCGCCGACAG CGATCGCCGG CCGACCCTCG TGAAGATGTG TACGGGCTGT
TCGCGCTGCT GGGACACCTG TCCGCGGGCC GGTCTCCGGT ATGAAAGACT GCCGACGCTC
GACGGTGCCG ATCCCGAAAC GGTCGACGGC GGCATCGGTC CGATCGAGGA CGGCTACGCC
GCAAGCGCGG CCGCCGACGT GGCCGGCGCA CAGCACGGCG GGGTCGTCAC TGCATTGCTT
GCGGCCCTGC TCGAATCCCC CGATGGGATC GACGGGGCCG TTGTCGCCAC GGAAGCAACG
GACGGCACCG GACTCGCCGA GCCAGCGCTG GCGACCACGC CGGCCGAGGT TCAGGAATAC
GCCGGGACGT TGTTCACCCA ACCGTTGCAA CTTGCAGCGC TTGAGGAACT GCTTGCTGAT
GCGGATCTCC CGGCGGACCC GAGCCTGGCA CTTGTCGGCA CGCCCTGCGT GATCGAAGGC
GTGACTGCAC TCGACCGGAG CCCCTACCGC GATGACCGTT TCGACGAATC GCGCCCGCTC
GATCACGTCG ACCTGACGGT CGCACTCACG TGCACGCAAG CGCTGGACGA CGAGGGGCTC
GAACACGTCC TCTCCCGGGA GTACGGCCTC GATCCTGACG ACGTGGCGGG CCTGGATCTC
GTCGGCCAGG GGATCCGGAT CGACCTGACC GATGGCGGAG ACGAGCGCGC CCCCCTCGGG
GACTTTCGGG GAGCGATCTT AGACGGGTGT CTGGAGTGTG CCGACGCGAC GGGGGGGACG
GCCGACCTCA CGGTTGGGAC CGTCGGCAGC GCACAGGGGG AGTCGACGGT GCTGGTCAGG
ACCGAGCGTG GGGCAGCGGC GTTCGACCGT GCCGAGGCTT CACTCGACGC CAGACCACTC
GAAGCCCTCG CGCCCGTCGA ACAGCTCGCA CAGTGGAACG CGGATCGCGC CCGAGAGGCG
ACGGCCCGGG ATATCGACCC CGAGGGCGAC CTGTGGATCC CCTACAGCGC CCACCGGGAA
GCGTACGATG ACACCGACCG CGCGCCGGTC GCGTTCAACC CGGCGCGCGT TCACCAGTAC
GAGGAGTGGT GCTGA
|
|---|
| Protein sequence | MPTEKSPQPR APAVGDDPRE ATTDVQPPDG KVRFRHLDEA VIEADRCVQC GSCVAACPSD
SIGIADSDRR PTLVKMCTGC SRCWDTCPRA GLRYERLPTL DGADPETVDG GIGPIEDGYA
ASAAADVAGA QHGGVVTALL AALLESPDGI DGAVVATEAT DGTGLAEPAL ATTPAEVQEY
AGTLFTQPLQ LAALEELLAD ADLPADPSLA LVGTPCVIEG VTALDRSPYR DDRFDESRPL
DHVDLTVALT CTQALDDEGL EHVLSREYGL DPDDVAGLDL VGQGIRIDLT DGGDERAPLG
DFRGAILDGC LECADATGGT ADLTVGTVGS AQGESTVLVR TERGAAAFDR AEASLDARPL
EALAPVEQLA QWNADRAREA TARDIDPEGD LWIPYSAHRE AYDDTDRAPV AFNPARVHQY
EEWC
|
|---|
| |