| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0143 |
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| Symbol | |
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| ID | 8382405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 140855 |
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| End bp | 141829 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644971201 |
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| Product | Squalene/phytoene synthase |
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| Protein accession | YP_003129064 |
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| Protein GI | 257051231 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.699038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGGCC GATCCGTCAA AACAAGCAAG GCAATCCACC GGCGGACCGG AAAGACGTTT
TATATCGCCA CGAGATTGCT TCCCGAGCGA GTGCGGGAAG CGACGTACGC TCTATATGCG
TTTTTCCGGA TCGCCGACGA CGTGGTCGAC CGCCCGGACC CGCCCGATGC CGAGACCCAA
CGACGCCATC TGGAAGCGAT CCGCGCCGCC GCAAACGGTG AACAGATCCA GCGGGGAGTC
CTCTCGGAGA CGGACCGTGA GGTTCTGGAG ACGTTTCGAT CGCTTGCCGA GGAGGCCGAC
ATCGATCCCG CCGAGATCGA CGTTTTCATC GACGCGATGG CCCAGGACAT CGATCATTCG
GGTTACGAAA CCTACGAGGA ATTACGTGGC TACATGCGCG GCTCCGCCGC TGCCGTCGGA
AACATGATGC TCTCGGTCAT GGACCCACCG GAAAGTGATC GTGCCACGCC TCACGCCAGG
TCACTGGCCG AGGCATTTCA ACTGACGAAC TTCGTCAGAG ACGTGCGGGA GGACATCAGC
GAGTACGATC GGGTGTATTT ACCGGACGAA ACGCTCGATC GGCACGACGT GACGGAAACA
CAACTCCGGC GCGGTGACAT GACCGACGAC GTGGCTGCCG TTATCCGGAC CGAGCTTCAC
CGGACTGAAT CCCTGTACCG ACACGGTGTG GCGGGGATAC GGTACCTCCC CGAGGACTGT
CAGTTCGCCG TCCTGTTGGC GGCAGTCTTG TACGCTGATC ACCACCGACA GATCAGACAC
CTCGAGTACG ACGTCCTGAA CGGCGACGCG TCGCTGTCGA TGACGCGACG GCTGTGGCTA
CTTGCCCGAA CCTGGTATCA CTGGCGACGG ACCCACGATC CCGAAGCAGC GTTCTACGCG
GCAAGTGCAA TTTCGGAAGA CGGGCCGGCG AGCGATCACC CGGATCCACA GTTACAACCG
GATCGCGTGA TCTGA
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| Protein sequence | MIGRSVKTSK AIHRRTGKTF YIATRLLPER VREATYALYA FFRIADDVVD RPDPPDAETQ
RRHLEAIRAA ANGEQIQRGV LSETDREVLE TFRSLAEEAD IDPAEIDVFI DAMAQDIDHS
GYETYEELRG YMRGSAAAVG NMMLSVMDPP ESDRATPHAR SLAEAFQLTN FVRDVREDIS
EYDRVYLPDE TLDRHDVTET QLRRGDMTDD VAAVIRTELH RTESLYRHGV AGIRYLPEDC
QFAVLLAAVL YADHHRQIRH LEYDVLNGDA SLSMTRRLWL LARTWYHWRR THDPEAAFYA
ASAISEDGPA SDHPDPQLQP DRVI
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