| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0101 |
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| Symbol | |
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| ID | 8382363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 96581 |
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| End bp | 99541 |
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| Gene Length | 2961 bp |
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| Protein Length | 986 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644971160 |
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| Product | type I site-specific deoxyribonuclease, HsdR family |
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| Protein accession | YP_003129023 |
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| Protein GI | 257051190 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAACG AACAACCATC TGAGGGCGGC CTTCAGACAT CGGTCCTCCA GTGGCTCGAC
GGCCTCGGGT GGGAGACGTA TGACCCAGAC GAAGGCCACG GCGCGACGGT TCTCGACGAG
CGATACGGCC GCCAACGCTC GGAGGTCATC TACTGGGACC TGCTCGCCGA GGCCGTCGTC
GAGATCAACG ACGAACTGAC CGAGGCCAAC GTCGACCGCT TTCTCAACTC GCTCCGGCGC
GACCTCGATC ACGACAACCT GCTCGACGGC AACGAGGCGT TCCACGAGAT CCTGACCACG
GGCAAGAAAC ACACCGTCGA CCAGCAACAC AACGGCACGA AGACGATCTA CGCCGACTTG
ATCGACTTCG AGCACCCCGA GAACAACCGG CTCCACGCTG TCGACGAGTT CGCCGTCTCC
CGACGCGGCT CGATTCGCCC CGACGTGACC CTGCTCATCA ACGGGATCCC CATCGTCCAG
ATGGAACTGA AATCCGTCAC CCAGGACAAC GACTTCTACG ACGCGATCAC CGACCTCCAG
GCCTACGAGG AGAAGGTCCC ACGGGCATTC ATCCCGACGC TGTTCAACGT CGCCGCCGAC
CAGAGTGTCT TCCAGTACGG AGCCGTCCGA GCCCCCCGCG AGTTCTACCA AGGGTGGACG
ACCGCACCCG AGGCCTACCA GTCTGACAAC GACGTCAAGC AGGCCGTCCA GGCTTTGCTG
AACCCTCAGA CGCTACTGGA CATCCTGAAG TACTTCGTCT TTTTCGAGGA GCAACCGGAC
CAAGACGCGA AGATCATCCC CCGCCATATG CAGTACTACG CGGTGAAGCG GATCCTCGAC
CGTGTCGAGC GCGGCGATCA CCGCAAGGGA CTGATCTGGC ACACCCAGGG CTCGGGGAAG
TCGTTCACGA TGCTGTTCAC GGCGAAGAAC CTCCTCGAAC GCGACATTCT CGACGCCCCG
CAACTGTTTG TCGTCGTCGA CACGGACAAA CTGAACAGCC AGATGCGCGA CCAGCTCGCC
AACCTCTCCT TCGAGCGCTG GACCGAGGCC GAGAGTATCG AGGGACTCGA AGACACCATC
GCGGCGGGCC GGAGCGAACT CGTCGTGACG ACCATCCAGA AGTTCCAAGA CGTCGATCCC
GGCGTCCAGT CGACCGACGA GGCCGTCGTG ATGTCCGACG AAGCCCACCG GTTCTTGGAG
GCCGATCTCG GGAGCAGACT CGAAGCCGCC CTTCCCGATG CGTACCACTT CGGCTTTACC
GGGACGCCCG TCCGCGAAGG CGACCGCGAG AAGGACCGCA ACACGTTCGA CGAGTTTTCT
CCCGAGGGCG AGGAGTACCT CCACCGCTAC TCGATCAAGG ACGGCATCGA CGACGAGCTG
ATCCTCCCGG TTTTCTTCCG ACTCCGCCAC GAGATGGACT GGGACGTCGA CGAGGCCGGC
CTCGACGAGG AGTTCGACGA GGCGTTCGCC ACCCTCCCCA AAGAGGAGAA GTTGGCGATC
ATCCGCGATC ACGTCACCAG TCGGATGCTC GCCGAGATCG AGCCCCGCGT CGAACGTGTG
GTCGCCGAGA TCGACGATCA CTTCGATGGC GTCGAGAAGA ACGGCTGGAA AGGCATGGTC
GTCACCCCGA GTCGGGAGTC GGCGGCCATG TACGGGGAAC GCTTGGTCGA CCGGCGAGGC
GAGGACGCCG TTGACGTTCT CTTTACCACG ACGCAAGACG ATCCGGAGTT ACTCCAGCAG
TTCCATACCG ATCCCGGCGA GCGTGATCAG ATCGTCCGGG ACTTCAAAAA CGAAGACGAT
CCCAAACTCC TCGTGGTCCA CAATATGCTA CTGACGGGCT TTGACGCCCC TGTACTGAAG
ACGATGTACT TGGACCGGGA ACTCCATGAT CACACTCTCA TGCAGGCGAT CGCCCGCACG
AACCGGCCCG CTGATGGCAA GGAGAATGGC GAAATCGTCG ACTTCCAGGG TGTCTTCGAG
AATATCGACG ACGCCCTCGA CTACGACGAC GAGACGAAAC AGTACGCGGC CCAAGACAGC
GAGCAACTGT TCGAGAAACT CCAGAACCAA CTCGACGCAG TTCTCGATAT CTTCGAGGGA
ATCCCCAGGG AGGACAGCCA GGAGGTCGTC GACGAGTGCC TTGACCGAGT GAGTACCCAT
CCTGAGAAGC GAGAGTTCAA GCAAGGGTTC CGACGACTCC AGGACCTCTA TGAATCGGTC
TCGCCAGATC GCCGACTTGT CGAAGAAGGG ATCGATGAGG ATTACGGGTG GCTCGGGCGG
ATCCACACGG CTTTCCAGCG GACGGCCAAC CGCTCGGAAC GACCTGAAGA CGAGATGCGC
GAGAAGACGC GTGAAATCGT CGAGGAGCAC GTCGACATCG GCGAGATCAA GCGGGATTAT
CCCGTCTACG AACTCGGCGC GGAGTACTTG GAGGACCTGG ACCACCTCAG GAGTGACGCC
GCAAAGGCGT CGACGATCGC TCACGCCATC CAGGAGAGCA CGCAATCTCG AATGGGACAG
AACCCCCGCT ACGAACGACT GAGCGAGCGC GTGACCGACA TCGTCGAGGA GTGGCAGGCT
GGCGACAGAG CCGATCCCGA GGCCGTCGAG GCGCTCCGGG AGGTCGAAGC AGAGGTGCTT
GCCATCGAGG AGGAGGCTAA CGAACGCGGG ATGTCCGATG CCGAGTTCGC TATCTTCACA
GACATCACTG AGGAGCGAGA TCTCGATCTC TCTGAGGACA CCGTCGAAGC ACTTGCCCGC
GACATCGTAG CCGAGTTCGA CGACCGCGTC GACACGAGTT ACGAAGGATG GGAGACGAAC
GACCAGACGG TCAAGGAGAT CGAACTTGTA CTGTTGGATG TACTGGTGAA AGAACACGAC
CGAGGCGAAC TGGTCACCGA CGAGTTCATC GACGCCGTCC ATACCTACCT GATTCAAAAC
TATGTCGCAG ACGACGAGTA A
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| Protein sequence | MANEQPSEGG LQTSVLQWLD GLGWETYDPD EGHGATVLDE RYGRQRSEVI YWDLLAEAVV
EINDELTEAN VDRFLNSLRR DLDHDNLLDG NEAFHEILTT GKKHTVDQQH NGTKTIYADL
IDFEHPENNR LHAVDEFAVS RRGSIRPDVT LLINGIPIVQ MELKSVTQDN DFYDAITDLQ
AYEEKVPRAF IPTLFNVAAD QSVFQYGAVR APREFYQGWT TAPEAYQSDN DVKQAVQALL
NPQTLLDILK YFVFFEEQPD QDAKIIPRHM QYYAVKRILD RVERGDHRKG LIWHTQGSGK
SFTMLFTAKN LLERDILDAP QLFVVVDTDK LNSQMRDQLA NLSFERWTEA ESIEGLEDTI
AAGRSELVVT TIQKFQDVDP GVQSTDEAVV MSDEAHRFLE ADLGSRLEAA LPDAYHFGFT
GTPVREGDRE KDRNTFDEFS PEGEEYLHRY SIKDGIDDEL ILPVFFRLRH EMDWDVDEAG
LDEEFDEAFA TLPKEEKLAI IRDHVTSRML AEIEPRVERV VAEIDDHFDG VEKNGWKGMV
VTPSRESAAM YGERLVDRRG EDAVDVLFTT TQDDPELLQQ FHTDPGERDQ IVRDFKNEDD
PKLLVVHNML LTGFDAPVLK TMYLDRELHD HTLMQAIART NRPADGKENG EIVDFQGVFE
NIDDALDYDD ETKQYAAQDS EQLFEKLQNQ LDAVLDIFEG IPREDSQEVV DECLDRVSTH
PEKREFKQGF RRLQDLYESV SPDRRLVEEG IDEDYGWLGR IHTAFQRTAN RSERPEDEMR
EKTREIVEEH VDIGEIKRDY PVYELGAEYL EDLDHLRSDA AKASTIAHAI QESTQSRMGQ
NPRYERLSER VTDIVEEWQA GDRADPEAVE ALREVEAEVL AIEEEANERG MSDAEFAIFT
DITEERDLDL SEDTVEALAR DIVAEFDDRV DTSYEGWETN DQTVKEIELV LLDVLVKEHD
RGELVTDEFI DAVHTYLIQN YVADDE
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