Gene Huta_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0100 
Symbol 
ID8382362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp95875 
End bp96600 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content62% 
IMG OID644971159 
Productprotein of unknown function DUF45 
Protein accessionYP_003129022 
Protein GI257051189 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCAGA CGACGAGTAA GCGAACGACG ACGCTGGCCG GCGAAGAAGT GGTCTACGAG 
GTCACGAAGA GCGATGACGC CACACAGGCC CGGATCGACG CGGGGATCGA CGGGATCACC
GTCATTGTAC CCTCAGACGC CCACGAGGAT CCGGAGGCGA TCCTGACGGA GAACGCGATG
TGGGTGCTCG ACAAGAAGGC AAAGTTCGAC AGCTATCGGG ACGATGTCCC GGATCGGACA
TTTGAGCCCG GTGAGACGTT CCCGTACCTG GGCGAGGAGC GCGAACTGGT CGTTGAGCCC
AGAAAGAAAT CCGTCGTTGG GGAAGGGACG ATCCACCTTC GACGAAGCGC GGTCGAACAG
TCGTCGATCA AGCGCGCCCT CCGGAACTTC TACCGACGTC AGGCCCGCGA GCACCTCTCT
GACCGTCTCG ATCACTTCGC CGCTGAGATG GGGCTGGAGT ACGACGGTCT CGAAATCAGA
AACCAGCGGA CCCGGTGGGG GAGTTGTTCG ACGAACGGAA CGATCAGCCT GAACTGGCGG
CTGCTAATGG CCCCGCCAGA GGTGATCGAC TACGTCGTGG TCCACGAACT CGCCCACCTA
CGCGAGCCGA ATCACACCGA CATGTTTTGG TCACTCGTGG CCGAGCACGA TCCCCGCTAC
GAGGAGCACG CCGAGTGGCT GGAGGAGCAC AGCGCCAGAC TCGTGTTCAG TCGCGAAGAT
CTCTGA
 
Protein sequence
MSQTTSKRTT TLAGEEVVYE VTKSDDATQA RIDAGIDGIT VIVPSDAHED PEAILTENAM 
WVLDKKAKFD SYRDDVPDRT FEPGETFPYL GEERELVVEP RKKSVVGEGT IHLRRSAVEQ
SSIKRALRNF YRRQAREHLS DRLDHFAAEM GLEYDGLEIR NQRTRWGSCS TNGTISLNWR
LLMAPPEVID YVVVHELAHL REPNHTDMFW SLVAEHDPRY EEHAEWLEEH SARLVFSRED
L