| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0056 |
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| Symbol | |
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| ID | 8382316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 55964 |
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| End bp | 56869 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644971114 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_003128978 |
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| Protein GI | 257051145 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0183789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGAAA CCGATCTCGA AGATCTACGT CGGGGTACTG ATCTCGTCAA GCGTGGCTTC
GCGAAGATGC AAAAGGGCGG CGTCATCATG GACGTCGTCA GCCCGGAACA GGCCCGGATC
GCCGAGGACG CCGGTGCTGT CGCCGTGATG GCCCTAGAAG CGGTCCCGGC GGACATCCGC
AAGCGCGGCG GCGTCGCGCG GATGGCCGAC CCGGCGGATA TCCAGGAGAT CATCGACGAG
GTTTCGATCC CGGTAATGGG CAAGTCCCGG ATCGGCCACA CCAAGGAAGC CCAGATCCTC
GAAGCCATCG GCGTGGACAT GGTCGACGAG AGCGAGGTCC TGACGCCCGC CGACGACGCC
TATCACATCG ACAAGCGCGA CTTCACGACC CCGTTCGTCT GCGGGGCGCG CAACCTGGGC
GAGGCCCTGC GTCGCATCGA CGAGGGCGCG GCGATGATCC GGACGAAAGG CGAGGCCGGC
ACGGGCGACG TCAACCAGGC CGTCCACCAC CAGCGAACGA TCAAGGGCGC GATCCGCCAG
TTGGAGGGGA TGAGCCACGA GGAGCGCGAG GCATGGGCGC GTGAGCACGA AGCCCCAGCC
GAACTCGTCC ACGAGACCGC TGAGATGGGT CGTCTCCCAG TCGTCAACTT CGCCGCCGGT
GGGATCGCGA CGCCTGCGGA TGCCGCACTG ATGATGCACC ACGAGTGTGA CGGCATCTTC
GTCGGGTCGG GTATCTTCGG TGCGGCGGAC CCCGAGGCGA TGGGTCGGGC GATCGTCGAG
GCCGTCAACA ACTACGACGA CCCCGAACGG CTGGCCGAGA TCGCTGCCGG GACCGGCTCC
GGGATGAAGG GCGACGCCAA CGTCGACCTG CCGGAAGACG AGCAGTTGCA GGGCCGAGGC
GTCTGA
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| Protein sequence | MTETDLEDLR RGTDLVKRGF AKMQKGGVIM DVVSPEQARI AEDAGAVAVM ALEAVPADIR
KRGGVARMAD PADIQEIIDE VSIPVMGKSR IGHTKEAQIL EAIGVDMVDE SEVLTPADDA
YHIDKRDFTT PFVCGARNLG EALRRIDEGA AMIRTKGEAG TGDVNQAVHH QRTIKGAIRQ
LEGMSHEERE AWAREHEAPA ELVHETAEMG RLPVVNFAAG GIATPADAAL MMHHECDGIF
VGSGIFGAAD PEAMGRAIVE AVNNYDDPER LAEIAAGTGS GMKGDANVDL PEDEQLQGRG
V
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