Gene Huta_0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0025 
Symbol 
ID8382285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp26814 
End bp27863 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content63% 
IMG OID644971083 
ProductDMSO reductase family type II enzyme, iron- sulfur subunit 
Protein accessionYP_003128947 
Protein GI257051114 
COG category[C] Energy production and conversion 
COG ID[COG1140] Nitrate reductase beta subunit 
TIGRFAM ID[TIGR03478] DMSO reductase family type II enzyme, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.380385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCACG ACGATGTCGA CATCGCGGAG GGTGTCGACC ACCAGGTCGC GATGGTGATG 
GACCTCAACA AGTGTATCGG GTGTCAGACC TGTACGGTCG CCTGCGAGAC ACTCTGGACC
GAGCGGGAGG GCACCGAGTA CATGTACTGG AACAACGTCG AGACCCGCCC CGGATCGGGC
TATCCCCGCG ACTGGGAGGA GAAAGGCGGC GGCTGGGAGT CCGCGGAGCA CAACCAGCGC
TCCGTCGGGG AGATTCCCTC CCAGCAGGAT TACGGCGAGA ACTGGGAATT CGATCACGAG
GGCATCCTCA AGGAGGGCGA AGACAAGGCC CTCGAACCCG AGAACGTCGA TCCCGAGTGG
GGGCCCAACT GGGACGAGGA CCAGGGTGCC GGCGAGCACC CCAACAACTA CTACTTCTAC
ATGCCCCGGA TCTGCAACCA CTGCACCCAC CCCTCCTGTG TGGAGGCCTG CCCCCGCAAG
GCCATTTACA AGCGTGAGGA AGACGGCATC GTTCTCGTCG ATCAGGAGCG CTGTCGGGGC
TACCGCTACT GCGTCGAGGG CTGTCCCTAC AAGAAGGTCT ACTACAACGC CGTCACGAAG
CGCTCCGAGA AGTGCGTCTT CTGTTACCCG CGAATTGAGG GCGAAGGCCC CGACGACGAG
GTCCACCCGC CGGCCTGCGC GGATCAGTGT ACCACGCAAC TCCGTCTGGT GGGCTATCTC
GACGACCGGG ACGGCCCGAT CTACAAGCTC GTCGAGCAAT ACGAGGTCGC CCTGCCCCTG
CATCCGGAGT ACCAGACGAC GCCGAACGTC TACTACATCC CGCCGTTCGC CCCGTCCCAG
CATAGCGAGG ACGGCGAGAC CGTCGACGTG GATCGGATCC CGCGATCGTA CCTCGAAGAG
CTGTTCGGCG AGCAGGTCAA CGATGCGCTG GACACGATCG AACGTGAACG CGCGAAGGTC
GAACGCGGCG GTCACAGCGA ACTGATGGAG ATCCTTCAGG ACAAGAATCC CGCCCAGCAG
TACCGCCTAG AGGTGTTCGA CGATGCGTGA
 
Protein sequence
MAHDDVDIAE GVDHQVAMVM DLNKCIGCQT CTVACETLWT EREGTEYMYW NNVETRPGSG 
YPRDWEEKGG GWESAEHNQR SVGEIPSQQD YGENWEFDHE GILKEGEDKA LEPENVDPEW
GPNWDEDQGA GEHPNNYYFY MPRICNHCTH PSCVEACPRK AIYKREEDGI VLVDQERCRG
YRYCVEGCPY KKVYYNAVTK RSEKCVFCYP RIEGEGPDDE VHPPACADQC TTQLRLVGYL
DDRDGPIYKL VEQYEVALPL HPEYQTTPNV YYIPPFAPSQ HSEDGETVDV DRIPRSYLEE
LFGEQVNDAL DTIERERAKV ERGGHSELME ILQDKNPAQQ YRLEVFDDA