| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0019 |
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| Symbol | |
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| ID | 8382279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 20245 |
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| End bp | 20931 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644971077 |
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| Product | Bacterio-opsin activator HTH domain protein |
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| Protein accession | YP_003128941 |
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| Protein GI | 257051108 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.67767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGGGTA TTCGGGCGAA ACTCGTCATC GAGGAACCAC CCCAGTGTGA CGTCGCGGCT
GTGTCCCGGG ACTGTGGACC AGTGGCATCG GTGTCACGGA GCGCCGTCCC GGACGAGGAT
GGGCGGGTCC ACGACGAGTT CACTGTCCGC GAGGGCGATT GTCCGGACAC GCTGGGTGAC
GCCACAGCGA TCTTTCAGGA TGATCGCCGG ACGATCTATC GGCTGGCGCG ATCCCGTGGC
CAGGGCTGTG CTTGTGAATG TATCGAGCGA GAAGGCTGTA CCGTTCGAGA CGTACAGGTC
GTCGACGGAA CGCTGTTCGT GACCGTCCTT GCCGCCGATC TCGATGGCAT CAGAGCCATT
GTCTCAACAC TTCGAGAATC CCGTGATGGC GTCCAGGTAG GAACACTCGT CCGAGCCCCG
CCGGAGAGCG AATCGGGGCC GCTGTGGGTC ACTGATCCTG GCGAATTGAC GGCCCGCCAA
CGGGAAGTCT TAGAGACTGC ATACGAAATG GGTTACTTCG AATATCCACG GAACGCCACT
GCTGAAGCGG TCGCAACGGA ACTTGACGTC GCGACGCCGA CGTTCACCGA ACATCTGGCG
GCCGCCCAGC GCAATCTCCT GGAAGGGTTC CTGGACGGGT CAGATAACCA GTCCGACACG
ACCATCCAAT CAAGTCACGG ACAATAA
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| Protein sequence | MEGIRAKLVI EEPPQCDVAA VSRDCGPVAS VSRSAVPDED GRVHDEFTVR EGDCPDTLGD
ATAIFQDDRR TIYRLARSRG QGCACECIER EGCTVRDVQV VDGTLFVTVL AADLDGIRAI
VSTLRESRDG VQVGTLVRAP PESESGPLWV TDPGELTARQ REVLETAYEM GYFEYPRNAT
AEAVATELDV ATPTFTEHLA AAQRNLLEGF LDGSDNQSDT TIQSSHGQ
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