Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_0008 |
Symbol | |
ID | 8382268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 7924 |
End bp | 8670 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644971067 |
Product | protein of unknown function DUF1405 |
Protein accession | YP_003128931 |
Protein GI | 257051098 |
COG category | [S] Function unknown |
COG ID | [COG4347] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0306436 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGGTG TCGGCCGTCG GTTCGAACGC GCAGTTGGCA CTGTTTTCGA CGCCGAGCTC CCGTCATCGC CGGGCCGACC GCAGTACGTC GCGCCGCTTC CAACCTGGCT CGAAGACATC GCGCTCCGGC TTGCGTGGCC GATCGCCATC GTCAACCTCG TCGGGACGGT CTTTGGGTTC TGGTATTATG CCGGCCGGCC ACTGAACGTC GAAGCGCCAC TTCTGGAAGG GCAACTCGGT GCTGCACCAC TCCCGGCCTG GCCAGTCGTC CCCGATAGCC CGATGGCGAC GTTGCTCATC GCGCTGTCGT TGCTCGCCTG GCGGCTGGAT TTGCAGGCCA ACTGGCTGCA CGTACTGGCC TTCTTTGGCT GTCTCAAACT GGGGCTGTGG ACGCCGTTCG TGCAACTGTT CGTCAACGGC CCCGAGGGCA TCGCCACCTG GTTGTACGTC TTCCTGATCA CGAGCCACCT CGCGATGGTG CTGGAAGCGT TCGTGATCCA TCGCTACGCG GAGTTCACGC TGTCGGCGAT CGGCGTCGCC ACTGTCTGGT ACGGATTCAA CGATCTCGTC GATTACTTCT GGCCGGTGCT TGACGGCCCG CATCACACCG TCTTGCGTGC CGAGCCGTAC GTCGACGGGG CGTACGACCA CGCAGTCCTC GCACACGATC TGGCGGCTGC CGCCGCGGTC GTGCTCACGA TTAGCGCGAT CGTCCTGGCG CTTGGAACCT ACCGCTCGCA AGCGTGA
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Protein sequence | MAGVGRRFER AVGTVFDAEL PSSPGRPQYV APLPTWLEDI ALRLAWPIAI VNLVGTVFGF WYYAGRPLNV EAPLLEGQLG AAPLPAWPVV PDSPMATLLI ALSLLAWRLD LQANWLHVLA FFGCLKLGLW TPFVQLFVNG PEGIATWLYV FLITSHLAMV LEAFVIHRYA EFTLSAIGVA TVWYGFNDLV DYFWPVLDGP HHTVLRAEPY VDGAYDHAVL AHDLAAAAAV VLTISAIVLA LGTYRSQA
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