| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0007 |
|---|
| Symbol | |
|---|
| ID | 8382267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 5482 |
|---|
| End bp | 7611 |
|---|
| Gene Length | 2130 bp |
|---|
| Protein Length | 709 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644971066 |
|---|
| Product | DNA mismatch repair protein MutL |
|---|
| Protein accession | YP_003128930 |
|---|
| Protein GI | 257051097 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
|---|
| TIGRFAM ID | [TIGR00585] DNA mismatch repair protein MutL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.953905 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAGA TCCGGGAACT CGATCAGACG ACGATCGAGC GCATTGCGGC GGGCGAGGTG
GTCGAGCGCC CGGCCTCCGT CGTCAAGGAA CTCCTCGAGA ACAGTCTCGA CGCCGATGCA
TCGCGCGTGC GGGTCGCCGT CGAGGCCGGC GGGACCGAAT CGATCCGGGT CAGCGACGAC
GGCGTCGGAA TGACTGAGGG AGACGCCCGC GCGGCGGTCC GCGAACACAC GACGAGCAAG
ATTCGAGACA TTTCGGACCT TGAATCCGGT GTCGGCACAT TGGGGTTCCG TGGGGAAGCA
CTCCACGCGA TCAGCGCAGT CTCGCGCATG ACGATCACGA CCCGGCCACG CGGCGGCGAT
CGGGGGACCC GACTCCGCGT CGAGGGTGGT GAGGTGACGA CCGTCGAAGC CGCTGGCTGT
CCGGAAGGGA CCACCGTCGA GATCGCGGAC CTCTTTTACA ACGTGCCGGC CCGCCGGAAG
TATCTCAGCC GGGACGCGAC CGAGTTCGAC CACGTCAACA CGGTGGTGCG TAACTACGCG
CTGGCCAATC CGGCTGTCGC GGTGGCACTC GAACACGACG GCAGGGAGAC CTTCGCGACG
ACGGGCGGTG ACTCGCTTCG CGAGACGGTA ATGGCCGTCT ACGGGCGTGA GGTGGCGGAG
TCGATGATCG ACGTCGACGC CCGGGAGTTG CCGGCGGGAC CACTCGACGC CATCGACGGG
CTGGTGAGCC ATCCCGAGAC CAATCGGGCG GATCGCGAGT ACGTAGCGAC GTTCGTCAAC
GGCCGGTACG TCCGATCGAG CGCCGCGCGC AACGCCATCG TCGAAGCCTA CGGCAACCAG
CTGTCCCCGG ATCGGTATCC ATTCGCCGTG CTTGACCTTT CATTGCCCGC GGGGACGGTC
GACGTCAACG TCCACCCCCG GAAGATGGAA GTCCGGTTCG CTGACGAGGC TGGACTCCGA
GAGCAGGTCC GGGCCGCCGT CGAGGAGACA CTGCTGGAAA ACGGACTGAT CCGCTCCGGG
GCCCCCCGCG GCCAGTCTGC GCCCGAACAG ACCGAGATCG ATCCGACGGC GACCACACCC
GACAGTGGCG TGAGTACGTC AGAGAGTAGT CGGGAGGAGT CCGAAAGTGA GCCATCGATC
GCCAAAGGGA CCAACGATGC GTCGAGACCT TCGGGTAGCG ACCAGTCAGC CGAACCGACT
CCAGCGGCGA GCAAATCGGA TGCGAGCCAG CGGACCGAAA GTGAGCATGG GTTCACGAAA
GCGCCCAATC AGGCTGAAAC CGATACGGAG CCGGAACGCC GGACGGGGCG CACACAGCAC
GGAACCGAAC CGGACAGCGC GGCCCCTCCG GCAGAGACGG GATCACCGGC GTCCGCCGGC
CACGGTGAGG GCACGTCTCA AGGATCCGGC GAGCCCGAAC GGCGTGGGGC TGGTGATGCC
GAGACGGCGG TGGTCGATGC CGGTTCCCAG ACCCGCCTGG AGAGTGGCGA GGAGCCGCTC
GAGCAGACGT TCGACTCGTT GCCGTCGATG CGGGTTCTCG GGCAGTTCCA GGAGACGTAC
GTCGTCGCCG AGACGGATAC CGGACTCGTC TTGATAGATC AGCACGCGGC TGACGAACGA
ATCAACTACG AGCGTCTCCG GGACGCCTTC GCGGGTGAGA CGACGACGCA GGCGCTGGCC
CAGCCGGTCG AGATCGATCT CACGGCCAGG GAATCCTCGC TGTTCGAGGA CTTCCAGGCG
GCGCTCGCGC GACTCGGGTT CAGTGCCGAA CGGGTCGACG ACCGGACCGT TGCAGTCACG
ACCGTGCCGT CGCTGGTCGC CGAGACTGCC GATCCCGAGC TCCTTCGGGA CGTGCTCTCG
TCGTTCGTCG ATAGCGACAG CGATCCGGGG GCGACCGTCG AGGCGGCGGC CGAGGCGGTG
CTTGCCGACC TCGCTTGCTA TCCGTCGATC ACCGGGAACA CGTCGCTGAC AGAGGGGTCG
ATCGTCGACT TGCTCGAACG GCTCGAGGCG TGTGAGAACC CCTATGCGTG TCCGCACGGC
CGCCCAGTCG TCGTCGAGAT CGACGCCGAC GAACTGGCCG AGCGCTTCGA GCGGGACTAT
CCCGGCCATA CGACGAGACG ACTCGATTGA
|
|---|
| Protein sequence | MDEIRELDQT TIERIAAGEV VERPASVVKE LLENSLDADA SRVRVAVEAG GTESIRVSDD
GVGMTEGDAR AAVREHTTSK IRDISDLESG VGTLGFRGEA LHAISAVSRM TITTRPRGGD
RGTRLRVEGG EVTTVEAAGC PEGTTVEIAD LFYNVPARRK YLSRDATEFD HVNTVVRNYA
LANPAVAVAL EHDGRETFAT TGGDSLRETV MAVYGREVAE SMIDVDAREL PAGPLDAIDG
LVSHPETNRA DREYVATFVN GRYVRSSAAR NAIVEAYGNQ LSPDRYPFAV LDLSLPAGTV
DVNVHPRKME VRFADEAGLR EQVRAAVEET LLENGLIRSG APRGQSAPEQ TEIDPTATTP
DSGVSTSESS REESESEPSI AKGTNDASRP SGSDQSAEPT PAASKSDASQ RTESEHGFTK
APNQAETDTE PERRTGRTQH GTEPDSAAPP AETGSPASAG HGEGTSQGSG EPERRGAGDA
ETAVVDAGSQ TRLESGEEPL EQTFDSLPSM RVLGQFQETY VVAETDTGLV LIDQHAADER
INYERLRDAF AGETTTQALA QPVEIDLTAR ESSLFEDFQA ALARLGFSAE RVDDRTVAVT
TVPSLVAETA DPELLRDVLS SFVDSDSDPG ATVEAAAEAV LADLACYPSI TGNTSLTEGS
IVDLLERLEA CENPYACPHG RPVVVEIDAD ELAERFERDY PGHTTRRLD
|
|---|
| |