| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0001 |
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| Symbol | |
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| ID | 8385332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 73 |
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| End bp | 2172 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644971060 |
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| Product | Vesicle-fusing ATPase |
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| Protein accession | YP_003128924 |
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| Protein GI | 257051091 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAGATG CCGACGCCGG GATCTCGGTC TCCGTCAAGG GGGCAAAGAA GCGTGACGCC
GGGAGAGGAA TCGCCCGGCT TCCGGAAGCA GTCCGTAATC GACTCGGCGT CCTGAGCGGC
GATCCGGTGT GTATCGAGGG CGACCGCCAG ACTGTCGCGA AGGTCTGGCC CGACGATGGC
ACCGGTGAGT ACGTGCGCAT CGACGCCGAT ACGCGATCGA ATGCCGACGT GACTGTCGGC
TCTGAGGTCT CCCTCCGCCG TGCCTCACTC CAGGACGCCG AGCGGGTCGA ACTCCGGCCG
ATCGACGGGA CGATCGAAGG CAACGGTGTC TCGACGATCG ACGATCGACT CGGGAACGTC
CCGGTCCGAC CCGGTGACCG CGTGACCGTC CCGGAGGTCG GGACGTTCCA CGTCGAGGAC
ACTGACCCGG ACGGGACGGT TCGCGTCGTC GACGGGACCA CGTTAACCGT GGGCCAACCG
ATAGACGACC CCGAGCCCAG TGAGGACGAC ACTACGGAGT CGGGAGACGC GAGCGAGCCC
GGCTCGGTCA CCTACGAGGA CATCGGTGGC CTCGACGACG AACTCGACCG GGTTCGGGAG
ATGATCGAAC TGCCGCTGTC TGATCCCGAC GTGTTCGATC GGCTCGGGAT CGAGCCGCCG
AAGGGCGTCC TGTTGTATGG TCCGCCGGGC ACCGGGAAGA CGCTGATCGC GAGGGCGGTC
GCCAACGAGG TCGACGCCTA CTTCGAGGCC ATCTCCGGCC CGGAAATCGT CTCGAAGTAC
AAAGGCGAGA GCGAGGAACA GCTCCGGGAA GCGTTCGAAC GGGCCGAAGA CGAGGCCCCG
TCGATCCTGT TCGTCGACGA GATCGACTCC ATCGCCGGCG CGCGAGACGA CGACAGTGAC
ATGGAAAACC GCGTGGTCGC CCAGTTGCTC ACGTTGCTCG ACGGATTGGA ATCCCGCGGC
CAGGTCGTCG TCATCGGCGC AACTAACCGG GTCGATGCCG TCGATCCGGC GCTTAGACGC
GGCGGGCGCT TCGATCGGGA GATCGAGATC GGCGTACCCG ACCGCGAGGG CCGCCAGGAG
GTACTCGAAG TTCACACCCG CGGTGTGCCA CTGGACGAGG ACGTCGATCT CGAACGCCTC
GCCGGCCGGA TGCACGGCTT CGTCGGGGCG GACGTGGCCT CGGTCGTAAC TGAGGCGGCG
ATGGAAGCCC TCCAGCGCGA ACGCGACGAA CCATCCGTGA CGCGGGCGGA CTTCGAACAG
GCCCTCGCCG GTGTCGAGCC GTCGGCGATG CGGGCCTACG TCGCCGAGTC ACCGGCTGGC
GATTTCGCGG ACGTGGGGGG TCTCGATGAC GTCAAGGAGA CCCTCAGAGA AGCTGTCGAG
TGGCCGCTCC GATACGGCCC GCTGTTCGAA GCGACCGACA CGGATCCGCC GACCGGCGTC
CTCCTCTATG GCCCGCCGGG CACCGGGAAG ACGCTGCTGG CTCGGTCCCT TGCCGGGGAA
ACCGACGTCA ACTTCATCCG CGTCGCGGGT CCGGAGTTGC TCGACCGCTA CGTGGGCGAG
AGCGAGAAGG CAGTTCGGGA GGTGTTCGAG CGTGCCCGCC AGACCGCACC CTCGATCGTC
TTCCTCGACG AGATCGACGC CGTCGCCACC CAGCGGGGCG AGAGCCACGA AGTGACCGAA
CGCGTGGTCT CCCAACTACT AACGGAGCTG GACGCGGCCG GCGAGGATCC GAACCTCGTC
GTCCTGGCGG CGACCAATCG CCGGGACGCC CTCGACGACG CGTTGGTTCG GCCCGGTCGG
CTCGAAACCC ACGTCGAAGT GCCCGCGCCC AGCCGGGACG CCCGGCGGGC GATTCTCGAC
GTGCACACGG CGACCAAGCC GCTGGATGCG GACGTCGATC TGACCGAAGT TGCGACCGAC
ACGGCGGGGT TTTCCGGGGC AGATCTCGAC GCGTTGGTCC GGGCCGCCTC GATGCGAGCC
ATCAGGCGGG TCGCTGCCGG TACCGACCCG TCTGTCGCCA ACGAACGGAC CGACGAGGTC
ACGATCCGCA AGCAGGATTT CGCGGCTGCT CGCGAACGGA TCGAGCCAAG CCTGGGCTAA
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| Protein sequence | MVDADAGISV SVKGAKKRDA GRGIARLPEA VRNRLGVLSG DPVCIEGDRQ TVAKVWPDDG
TGEYVRIDAD TRSNADVTVG SEVSLRRASL QDAERVELRP IDGTIEGNGV STIDDRLGNV
PVRPGDRVTV PEVGTFHVED TDPDGTVRVV DGTTLTVGQP IDDPEPSEDD TTESGDASEP
GSVTYEDIGG LDDELDRVRE MIELPLSDPD VFDRLGIEPP KGVLLYGPPG TGKTLIARAV
ANEVDAYFEA ISGPEIVSKY KGESEEQLRE AFERAEDEAP SILFVDEIDS IAGARDDDSD
MENRVVAQLL TLLDGLESRG QVVVIGATNR VDAVDPALRR GGRFDREIEI GVPDREGRQE
VLEVHTRGVP LDEDVDLERL AGRMHGFVGA DVASVVTEAA MEALQRERDE PSVTRADFEQ
ALAGVEPSAM RAYVAESPAG DFADVGGLDD VKETLREAVE WPLRYGPLFE ATDTDPPTGV
LLYGPPGTGK TLLARSLAGE TDVNFIRVAG PELLDRYVGE SEKAVREVFE RARQTAPSIV
FLDEIDAVAT QRGESHEVTE RVVSQLLTEL DAAGEDPNLV VLAATNRRDA LDDALVRPGR
LETHVEVPAP SRDARRAILD VHTATKPLDA DVDLTEVATD TAGFSGADLD ALVRAASMRA
IRRVAAGTDP SVANERTDEV TIRKQDFAAA RERIEPSLG
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