| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7283 |
|---|
| Symbol | |
|---|
| ID | 8363477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 9105434 |
|---|
| End bp | 9106102 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644969416 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003126883 |
|---|
| Protein GI | 256426230 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01633] putative phage tail component, N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.316954 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA TCCTATTATC CTTATCGCTG GTAAGCGTGA TGTATGGCTG TAATGCAGCA
GGCAGGGAGA AAAATCCTTT ACTGCAGAAG GACTACGCAT TAGCTGACAC GCTACACTAT
GATCACACTG TCATTGACGC ATTGAGAGAA AGCATATCCG GAAACATCAG CAGATTAGCT
CCTGCATTAC ATGAAGTGAA CGGAACAGGG GGACTGACAG ACGCGTTACA GTTTGAATAT
GATGTAAATG CAGACAACAG CAGCGACTAC GAAAAACTAC GAACAGCCCT CAAAAAGCAA
GGATATCTTT TATTTAAATC CGAGGAAAAT TTTGGTACCA AGCCTGATAA ATACGCAGTA
CTGAAGACCA ATAACCAGTT TGATATCATC CGGTTCCGGG CTACTAACGG GGCAAACTAT
GATATTACGA ACGACAGTAT TATGCGTAAA CTGCATCATC TGTATGATAA AGAACCATTT
GAAATAACGG GCGCCGACAT TGACTGGGTA GAAGTACATC TGAATAAGCT AAATCCTGCA
GATGCGATGA CATTTGCCAA TGATGTATAT GAGTTTTGTC CGGATCTGGC AGAGCAGGGT
ACAGAGACAG TGGAAAATCT GGCAGCTGAA ATACTGGAGA CAAAACAGCT ATTCCTCTGG
TGGGATTAA
|
|---|
| Protein sequence | MNKILLSLSL VSVMYGCNAA GREKNPLLQK DYALADTLHY DHTVIDALRE SISGNISRLA
PALHEVNGTG GLTDALQFEY DVNADNSSDY EKLRTALKKQ GYLLFKSEEN FGTKPDKYAV
LKTNNQFDII RFRATNGANY DITNDSIMRK LHHLYDKEPF EITGADIDWV EVHLNKLNPA
DAMTFANDVY EFCPDLAEQG TETVENLAAE ILETKQLFLW WD
|
|---|
| |