Gene Cpin_7222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7222 
Symbol 
ID8363416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp9024842 
End bp9025690 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content49% 
IMG OID644969356 
ProductABC transporter related 
Protein accessionYP_003126823 
Protein GI256426170 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4559] ABC-type hemin transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTTGC GTGCAAAAGA TATATCACTG TCCCTGGGAA AAGCACAGAT ATTGCGTGGT 
GTAAGCATGG ATGCGAATGC CGGCGAACTC TGTGTGATCA TGGGGGCCAA TGGAGCGGGT
AAATCAACAC TGCTGAAAGT AATAGCAGGG GAGTATATGC ACTATCAGGG TAGTGTGAAC
ATTGCCGGCA ATGAATTGAA AACATTACCG GTAGATGCCC AGGCCAGGAT GCGTGCCGTA
TTGTCACAAC AGATCACATT GAATCAGCCT TTCTCCGTAA TGGAAGTAGT GAACATGGGG
CGTTATGTAT ACAATACGCA TCTTACTGCG CTGGATAAAG AGATCGTAAC CTACGCACTG
AAGACGATGC AGGTATACAA CCTGCGGGAA AGGACATATC CGACGCTATC AGGAGGACAG
AAACAACGTG TGCAGATGGC CCGGGTACTG GCGCAGCTAC TGGAGGCGCC CGATCTGCGG
GCCACCGATT ATACCGGTAA AAAGATGCTG CTGCTCGATG AACCGGTGAC GGGTATGGAT
ATTCTTCATC AGCAGTTATC CCTGCAACTG GCTACCTCTC TCGCTGCCAG CGGCGTATTG
GTAGTAGCCG TGCTGCACGA CTTTCAGTTA GCTGCTGCTT ATGCAAACAG AATGCTGCTG
TTAAAAGATG GAGGCGTATA TGCACAGGGT ACAGTGGAAG AAATCCTGCG ACCTGCACAT
ATTAAAGACT GTTTCGGTGT GGAAGTAGCC GTACTGGAAC ATCCTCAATG TCATTATCCG
CTGGTGGTAA CCGCCGCTGC CGACGGCCTT TTTAAATCAC CTGCCGAAAA GGCAATAAAC
GTATTGTAA
 
Protein sequence
MMLRAKDISL SLGKAQILRG VSMDANAGEL CVIMGANGAG KSTLLKVIAG EYMHYQGSVN 
IAGNELKTLP VDAQARMRAV LSQQITLNQP FSVMEVVNMG RYVYNTHLTA LDKEIVTYAL
KTMQVYNLRE RTYPTLSGGQ KQRVQMARVL AQLLEAPDLR ATDYTGKKML LLDEPVTGMD
ILHQQLSLQL ATSLAASGVL VVAVLHDFQL AAAYANRMLL LKDGGVYAQG TVEEILRPAH
IKDCFGVEVA VLEHPQCHYP LVVTAAADGL FKSPAEKAIN VL