Gene Cpin_7175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7175 
Symbol 
ID8363369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8960634 
End bp8961749 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content46% 
IMG OID644969309 
ProductDNA-directed DNA polymerase 
Protein accessionYP_003126776 
Protein GI256426123 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAGTG AAACAAATAA GAAACTACGG AAGATCATTC ATATTGACAT GGATGCATTT 
TATGCATCTG TAGAGCAACG CGACAACCCT GAATATCGCG GTAAAGCAAT AGCAGTTGGA
GGATCTCCCG AAGGTAGAGG CGGCGTAGTG GCAACAGCCA GCTATGAAGC ACGTAAGTTT
GGTGTACGCT CTGCTATGCC TTCCAAAAGA GCATTACAGC TTTGCCCTGA ACTGATCTTT
ATCCGCCCGA GATTTGATGT GTATAAAGAA GCCTCCCGCA AAATACGGGA GATATTCTCC
CGCCATACCG ATATCATAGA ACCCCTCTCG CTCGATGAAG CCTTCCTGGA TGTGACCGAA
GACAAACAAC AGATCGGCTC TGCCATCGAA ATTGCAAAAC TGATCAAACA AGCCATAAAA
GATGAACTGC AACTCACCGC ATCCGCAGGC GTATCTGTGA ATAAGTTTGT CGCAAAAATT
GCATCCGATC TGAATAAACC CGACGGACTC ACATTCATCG GTCCTTCCTC TATTGAATCC
TTCATGGAAA AACTACCGGT CGAAAAATTC TTTGGTGTAG GAAAAGTCAC GGCAGATAAG
ATGAAGCGAA TGGGCCTGCA CACCGGTGCT GACCTGAAAC GCTTATCAGA AAATGACCTG
AAAACACACT TCGGGAAAGT GGGCGCATTC TATTACAGGA TTGTCAGAGG CATCGACGAA
AGAGAAGTAC AGCCACATCG TGAAACAAAA TCCCTGGGGG CAGAAGATAC CTTTCCCTAT
GATCTGACGC GCACAGAAGA AATGAATGCC GAACTGGAAA AGATCGCAGT AACGGTATAC
GAACGACTAA AAAGATATGG CCTGAAAGGC AGAACGGTTA CATTAAAAAT CAAGTACAGC
GACTTCAGAC AGATCACACG TAATCAGTCA TTCCCTGTTC CTGTCGGTGA CCTGGAAAAA
ATACTGGAAA CGGCGAAACA ACTGTTACTG TCAACAGAAC CGGAAGACAA ACCGGTACGC
TTACTGGGGA TCTCGTTGTC TAATTTTGGA GAGATCGTAC CGGTCAATAA CCGGCCGGAT
AATACCATAC AACTATCCCT CTTTGATGAT GTATAA
 
Protein sequence
MESETNKKLR KIIHIDMDAF YASVEQRDNP EYRGKAIAVG GSPEGRGGVV ATASYEARKF 
GVRSAMPSKR ALQLCPELIF IRPRFDVYKE ASRKIREIFS RHTDIIEPLS LDEAFLDVTE
DKQQIGSAIE IAKLIKQAIK DELQLTASAG VSVNKFVAKI ASDLNKPDGL TFIGPSSIES
FMEKLPVEKF FGVGKVTADK MKRMGLHTGA DLKRLSENDL KTHFGKVGAF YYRIVRGIDE
REVQPHRETK SLGAEDTFPY DLTRTEEMNA ELEKIAVTVY ERLKRYGLKG RTVTLKIKYS
DFRQITRNQS FPVPVGDLEK ILETAKQLLL STEPEDKPVR LLGISLSNFG EIVPVNNRPD
NTIQLSLFDD V