Gene Cpin_7154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7154 
Symbol 
ID8363348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8940731 
End bp8941774 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content48% 
IMG OID644969289 
Productaldo/keto reductase 
Protein accessionYP_003126756 
Protein GI256426103 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATACA GATTTTTAGG AGGATCAGGA TTGCAGGTGC CGGTATTGAC ATTCGGTACG 
GCCACTTTCG GCGGAAGTAA TGAATTTTTC AAGGCATGGG GTAGTACGCA GGCAGATGAG
GCGACAAGGA TGGTCAATCT TTGTCTGGAT GCCGGCGTTA ACTTATTTGA TACAGCAAAT
ACTTATTCTG ATGGTTTGTC TGAGGAGATC CTTGGTAAAG CCATTGAGGG GAAGCGGGAT
AAGGTGTTAA TATCCACGAA GTCAACCTTT CCTATGAGTA ACGCATCCGG CGCAAATTAT
CAGGGTTCCG GCCGTTCGCA GCTGATCAAA AATGTGGAAG CGAGTCTGAA GCGACTGAAT
ACAGACTATA TAGATATTTA TCACATGCAT GGTTTTGATG GTAATACGCC TGTGGAAGAG
GTATTACGCG GACTGGACGA TCTTATACAA AGTGGAAAGA TCAGATATAT CGCGGCTTCT
AATTTTTCCG GCTGGCACCT GATGAAATCA CTGTCTGTGT CTGAACGGTA TGGCTGGAAT
AAATATGTGG CGCACCAGGT GTATTATTCA CTGGTAAACA GGGAGTATGA GTGGGAGCTG
ATGCCATTGG GTGTTGATCA GAAAGTGGGT GCGCTGGTAT GGAGTCCGCT GGCTGCCGGT
ATGCTCGGTG GTAAATACCG TCGTAATCAG CCTTATCCGG CTGACAGTCG TGTAGCCCAG
GGTGGTAGTC CGGTACCTTC ATTCGCCGTG CCGGATGAAC TGTTATATAA TGTAGTGGAT
GCATTGGACG AAGTAGCCGC AGAAACAGGC AAATCAGTGG CGCAGGTAGC GCTCAACTGG
TTATTACAAA GACCGACAGT GTCCAGTATC ATTATCGGCG CCAGGAATGA AGAGCAGCTG
AAACAGAATC TTGCTGCGGT AGGATGGAAT CTGACGGTAG ACCAGGTAAA GAAACTGGAT
GCGGCCAGTG AGGCGCCGAC GATTTATCCG TACTGGCATC AGCGTGGTAA TCTGAAATTA
AACCCGCTGC CGAAGTTTTA TTAG
 
Protein sequence
MEYRFLGGSG LQVPVLTFGT ATFGGSNEFF KAWGSTQADE ATRMVNLCLD AGVNLFDTAN 
TYSDGLSEEI LGKAIEGKRD KVLISTKSTF PMSNASGANY QGSGRSQLIK NVEASLKRLN
TDYIDIYHMH GFDGNTPVEE VLRGLDDLIQ SGKIRYIAAS NFSGWHLMKS LSVSERYGWN
KYVAHQVYYS LVNREYEWEL MPLGVDQKVG ALVWSPLAAG MLGGKYRRNQ PYPADSRVAQ
GGSPVPSFAV PDELLYNVVD ALDEVAAETG KSVAQVALNW LLQRPTVSSI IIGARNEEQL
KQNLAAVGWN LTVDQVKKLD AASEAPTIYP YWHQRGNLKL NPLPKFY