Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_7124 |
Symbol | |
ID | 8363317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8912833 |
End bp | 8914236 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644969258 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_003126726 |
Protein GI | 256426073 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.650146 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAGT TTGATATAGT AGTGATAGGT TCAGGACCGG GCGGATATGT GGCAGCGATA CGTGCTGCGC AGCTAGGGTA TAAAACAGCG ATTATTGAGA AATACAGTAC GCTGGGAGGT ACCTGTACCA ATGTCGGATG TATCCCTACG AAAGCATTGC TGGACAGCAC CCATCATTAT CATGATGCCT TGCATAAGTT TGCTGTACAG GGGATTAATC TTCAGGGTAT TCAGCTGGAT TTTAAGCAGT TGTACAAAAG GAAAAGTGAG GTCGTAACGA AGAATACACA GGGGCTGAAT TACCTGATGA AGAAGAATAA GATAAGTGTG ATTCAGGGAC TGGCTTCTTT CAAGGATAAC TCGACATTAC AGGTAAGGGG TCAGGATGGG GTAAGCCGTA CCATTCAGGC AGGTAAGTAC ATCATCGCTA CGGGATCTAA ACCGGCGACT ATACCAGGAG TGGTATTGGA TAAGAAGAGG ATTATTACCT CAACAGAGGC ATTAGCATTG GAAGAACGGC CTAAAACAAT GGTGATTATC GGTGGTGGTG TGATAGGCGT AGAAATGGCT TCTATATTCA GCAGAATTGG TACAAAGGTG ACCATCCTGG AATATGCAGA CCGCCTGATT CCGACTATGG ATAGTGAATC GGGTATTACA CTGCAGAAAT TGCTGACAAA AGAAGGAATT GAGATCCTGC TGCAACAGTC TGTATTTAAA ACAGAAAATA CGGTCGATGC TGCGAAGGTC TGGTATAAAG ACGTAGCGGG TCAGGAACAA TCACTGACGG CGGATTATGT CCTGGTAGCA GTAGGAAGAA AAGCTTATAC GGATAACTTA GGTCTTGAAA ATACACAGGT GCAGCTGAAC CCAAGGGGAA TGATCGTTGT GAATGAGGTA TTACAGACGG CAGTTCCCAA TATCTATGCT ATCGGGGATG TGATCGGCGG CGCCATGTTA GCACATAAAG CAGAGGAAGA AGCCACTTTT GTAGTTGAGC GTATCCATGG TGGAAACCCG CATATTCATT ACGACCGTAT TCCATCCGTC GTTTATTCCT GGCCGGAAGT TGCTTCAGTA GGCGCCTCTG AAGAGGAACT GAAAAAGAAA CAGGTAGCGT ATAACGTCGG TAAGTTCCCC TTCTCTGCTA ATGCAAGAGC CAGGGCGGGA ATGGATACAG AAGGTTTTGT GAAAGTGCTG GCAGATCCGA AATATGGTGA AATACTGGGT GTGCATATTG TGGGTGCAAG GGCTGCTGAT CTGATTGCGC AGGCTGTTAC CGCCATGGAG TTTGAGATAA CAGTCAATGA AATGGGAAAA ATATCATACG CGCATCCGAC ATATGCGGAA GTATTGAAAG AAGCGTATAT CCTTGCTTCG GGACAAGCTT CTGTGAATAT TTAG
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Protein sequence | MEQFDIVVIG SGPGGYVAAI RAAQLGYKTA IIEKYSTLGG TCTNVGCIPT KALLDSTHHY HDALHKFAVQ GINLQGIQLD FKQLYKRKSE VVTKNTQGLN YLMKKNKISV IQGLASFKDN STLQVRGQDG VSRTIQAGKY IIATGSKPAT IPGVVLDKKR IITSTEALAL EERPKTMVII GGGVIGVEMA SIFSRIGTKV TILEYADRLI PTMDSESGIT LQKLLTKEGI EILLQQSVFK TENTVDAAKV WYKDVAGQEQ SLTADYVLVA VGRKAYTDNL GLENTQVQLN PRGMIVVNEV LQTAVPNIYA IGDVIGGAML AHKAEEEATF VVERIHGGNP HIHYDRIPSV VYSWPEVASV GASEEELKKK QVAYNVGKFP FSANARARAG MDTEGFVKVL ADPKYGEILG VHIVGARAAD LIAQAVTAME FEITVNEMGK ISYAHPTYAE VLKEAYILAS GQASVNI
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