Gene Cpin_7124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7124 
Symbol 
ID8363317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8912833 
End bp8914236 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content46% 
IMG OID644969258 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_003126726 
Protein GI256426073 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.650146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGT TTGATATAGT AGTGATAGGT TCAGGACCGG GCGGATATGT GGCAGCGATA 
CGTGCTGCGC AGCTAGGGTA TAAAACAGCG ATTATTGAGA AATACAGTAC GCTGGGAGGT
ACCTGTACCA ATGTCGGATG TATCCCTACG AAAGCATTGC TGGACAGCAC CCATCATTAT
CATGATGCCT TGCATAAGTT TGCTGTACAG GGGATTAATC TTCAGGGTAT TCAGCTGGAT
TTTAAGCAGT TGTACAAAAG GAAAAGTGAG GTCGTAACGA AGAATACACA GGGGCTGAAT
TACCTGATGA AGAAGAATAA GATAAGTGTG ATTCAGGGAC TGGCTTCTTT CAAGGATAAC
TCGACATTAC AGGTAAGGGG TCAGGATGGG GTAAGCCGTA CCATTCAGGC AGGTAAGTAC
ATCATCGCTA CGGGATCTAA ACCGGCGACT ATACCAGGAG TGGTATTGGA TAAGAAGAGG
ATTATTACCT CAACAGAGGC ATTAGCATTG GAAGAACGGC CTAAAACAAT GGTGATTATC
GGTGGTGGTG TGATAGGCGT AGAAATGGCT TCTATATTCA GCAGAATTGG TACAAAGGTG
ACCATCCTGG AATATGCAGA CCGCCTGATT CCGACTATGG ATAGTGAATC GGGTATTACA
CTGCAGAAAT TGCTGACAAA AGAAGGAATT GAGATCCTGC TGCAACAGTC TGTATTTAAA
ACAGAAAATA CGGTCGATGC TGCGAAGGTC TGGTATAAAG ACGTAGCGGG TCAGGAACAA
TCACTGACGG CGGATTATGT CCTGGTAGCA GTAGGAAGAA AAGCTTATAC GGATAACTTA
GGTCTTGAAA ATACACAGGT GCAGCTGAAC CCAAGGGGAA TGATCGTTGT GAATGAGGTA
TTACAGACGG CAGTTCCCAA TATCTATGCT ATCGGGGATG TGATCGGCGG CGCCATGTTA
GCACATAAAG CAGAGGAAGA AGCCACTTTT GTAGTTGAGC GTATCCATGG TGGAAACCCG
CATATTCATT ACGACCGTAT TCCATCCGTC GTTTATTCCT GGCCGGAAGT TGCTTCAGTA
GGCGCCTCTG AAGAGGAACT GAAAAAGAAA CAGGTAGCGT ATAACGTCGG TAAGTTCCCC
TTCTCTGCTA ATGCAAGAGC CAGGGCGGGA ATGGATACAG AAGGTTTTGT GAAAGTGCTG
GCAGATCCGA AATATGGTGA AATACTGGGT GTGCATATTG TGGGTGCAAG GGCTGCTGAT
CTGATTGCGC AGGCTGTTAC CGCCATGGAG TTTGAGATAA CAGTCAATGA AATGGGAAAA
ATATCATACG CGCATCCGAC ATATGCGGAA GTATTGAAAG AAGCGTATAT CCTTGCTTCG
GGACAAGCTT CTGTGAATAT TTAG
 
Protein sequence
MEQFDIVVIG SGPGGYVAAI RAAQLGYKTA IIEKYSTLGG TCTNVGCIPT KALLDSTHHY 
HDALHKFAVQ GINLQGIQLD FKQLYKRKSE VVTKNTQGLN YLMKKNKISV IQGLASFKDN
STLQVRGQDG VSRTIQAGKY IIATGSKPAT IPGVVLDKKR IITSTEALAL EERPKTMVII
GGGVIGVEMA SIFSRIGTKV TILEYADRLI PTMDSESGIT LQKLLTKEGI EILLQQSVFK
TENTVDAAKV WYKDVAGQEQ SLTADYVLVA VGRKAYTDNL GLENTQVQLN PRGMIVVNEV
LQTAVPNIYA IGDVIGGAML AHKAEEEATF VVERIHGGNP HIHYDRIPSV VYSWPEVASV
GASEEELKKK QVAYNVGKFP FSANARARAG MDTEGFVKVL ADPKYGEILG VHIVGARAAD
LIAQAVTAME FEITVNEMGK ISYAHPTYAE VLKEAYILAS GQASVNI