Gene Cpin_7121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7121 
Symbol 
ID8363314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8910598 
End bp8911581 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content47% 
IMG OID644969255 
Productthioredoxin reductase 
Protein accessionYP_003126723 
Protein GI256426070 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID[TIGR01292] thioredoxin-disulfide reductase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGCTG AAACTGAACA TATAAAGTGT CTGATCATCG GATCCGGTCC TGCAGGATAT 
ACCGCCGCTA TTTACGCTGC ACGTGCTGGT CTGCAGCCGG TAATGTATAC CGGCATTGAA
CCAGGCGGAC AACTGACAAA GACTACAGAA GTAGAAAACT TTCCGGGTTA TCCCACTGGT
ATTACCGGTC CTGTTATGAT GGAAGATTTT CGTATGCAGG CACTTCGCTT TGGTACAGAT
ATCCGTTATG ATTATGTCAG TGGTGTAGAT TTCAGTACTT ATCCATATGA GGTAACGGTA
GACGAGCGAA AGAAGATCAT GGCCGACAGC ATCATTATTT CCACTGGTGC TTCTGCGAAG
TGGTTAGGGC TGGAATCAGA AGCGAAATAC AATGGTTCCG GTGTTTCTGC CTGTGCGGTA
TGTGACGGTT ATTTTTTCCG TGGAAAAGAT GTGGCGCTTG TTGGCGCAGG AGATACTGCT
GCAGAGGAAG CTGTTTATCT GTCTAAGCTG GCCAATAAGG TATATATGCT GGTTCGCCGT
GATGAGTTCC GTGCTTCTAA ACTGATGGTA CAGCGTGTAC TTAATACTCC CAATATCGAG
GTGTTGTACA ATACCGAGAC CCTTGAGGTG CTGGGAGATG GCCGGAGTGT GACAGGTATA
AAAGTATACA ACAATCAACT GAAGCAGGAA TCGGCTATTC CGGTAACCGG ATTTTTTGTC
GCCATTGGTC ATACACCCAA CACCGCGATA TTCAGTGGCG CAATAGACAT GGATGAAGCG
GGTTATATCA AAACTAATCC AAGATCAACA GCGACCAATA TTCCTGGTGT GTTTTGCTGT
GGCGATGCGC AGGATCCTGT GTATCGTCAG GCGATCACTG CCGCCGGAAC GGGTTGTATG
GCAGCTTTAG ATGCAGAACG TTTTCTGAAT GAGCGTGAAG CGGCGCTTTC ATTTGTAATA
GGAGATCTTC AGCAGGCAAG TTAA
 
Protein sequence
MLAETEHIKC LIIGSGPAGY TAAIYAARAG LQPVMYTGIE PGGQLTKTTE VENFPGYPTG 
ITGPVMMEDF RMQALRFGTD IRYDYVSGVD FSTYPYEVTV DERKKIMADS IIISTGASAK
WLGLESEAKY NGSGVSACAV CDGYFFRGKD VALVGAGDTA AEEAVYLSKL ANKVYMLVRR
DEFRASKLMV QRVLNTPNIE VLYNTETLEV LGDGRSVTGI KVYNNQLKQE SAIPVTGFFV
AIGHTPNTAI FSGAIDMDEA GYIKTNPRST ATNIPGVFCC GDAQDPVYRQ AITAAGTGCM
AALDAERFLN EREAALSFVI GDLQQAS