| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7080 |
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| Symbol | |
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| ID | 8363272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8857735 |
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| End bp | 8858985 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644969213 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003126682 |
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| Protein GI | 256426029 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAAAA AGAGAAAGTG GCTATTGGCT GCCATTGTTA TTCCTGTAAT TGCCATCTGT
TATTTTCTAT TTGCCGGTAA AGCTGCGGAC AGCAGTATTA CAGCCAAAGT CCGGAAAGGT
AGTTTTCGTG ATGTAGTCAG CAGTTCCGGT GAACTGCAGG CCGAAAATAC CGTGTATATC
TCTGCGCCGG CCGATCTGCA GGCCAATCAG ATCTATGATG AGATCAAGAT ACAGGAGATG
GTGCCGGAAG GCTCACATGT AAAAGAAGGC GATTACATCG CTACACTCGA TCCAACGTTG
GTGAATAAAC GTATCAGTGA TATGCAACTA TCACTGGAAA AATCAAATTC AACCGTAACG
CAGACAGCAT TGGATACGGC GCTGACGCTA AGGGAAGCCC GCGATCAGAT GACCAATCTG
CAGTTCCAGA TGGAACAAAA GAAACTCGCA CTGGAACTCA GTAAATATGA GCCGCCCGCT
ACTATCAAAC AGGCCGAAAT CGACCTGCAG AAAGCACAGC GTGATCTTGT ACAGATGAAA
GACAATTACA AGATCAAACA GCAACAGGCG GCGACAAAGA TGGTGCAGGC TAAAAGAGAG
GCAGATGAAT TCGGAAGGAT CATCGGCCGT CTGGAAGAAC TGCGCAGCCG CTTTGTCATT
AAAGCGCCTA AAAATGGGTT ATTAGTATAT ATAAGCGACT GGGCAAGTGG TGGTAAAAAG
AAAACAGGAT CTGTCGTACG TTCCTGGGAC CCCCGCGTAG CCATGCTGCC GGACCTTTCA
TCTATGTTAT CCAAAGTCTA TATCAACGAA GTTGATATCA GCAAAATTCA CCAGTCACAA
AAAGTGACGA TGGGACTCGA CGCCTTCCCT GAAGTAAAAA TGGAAGGCGT CGTTAAGACG
GTGGCGAATA TCGGAGAGAC CCGTCCGGGC GCCACTGCAA AGGTGTTCGA AGTGAACATC
AAGTTGAATA AAGTAGATTC TATTCTGAAA CCCGGAATGA CTACCTCCAA CAATATCCTG
ATCAGTGAGG TACCTAAAAA ACTGATCATC CCACTGGAAG CCGTGTTTGC AGAAGGGAAG
ACCAGTTTTG TATACCTGAG AAAATCAGGT AACATTTCCA AACAACAGGT GACACTGGGT
AAATCAAACG ACGAAGAAGT AATTGTTGAA AAAGGACTGA CGGAAGGAGA TGTGGTATAT
CTCTCCGAAC CCGAGTCAGC AAAGGAAACC AAAATCACGA CATTAAAATA A
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| Protein sequence | MLKKRKWLLA AIVIPVIAIC YFLFAGKAAD SSITAKVRKG SFRDVVSSSG ELQAENTVYI
SAPADLQANQ IYDEIKIQEM VPEGSHVKEG DYIATLDPTL VNKRISDMQL SLEKSNSTVT
QTALDTALTL REARDQMTNL QFQMEQKKLA LELSKYEPPA TIKQAEIDLQ KAQRDLVQMK
DNYKIKQQQA ATKMVQAKRE ADEFGRIIGR LEELRSRFVI KAPKNGLLVY ISDWASGGKK
KTGSVVRSWD PRVAMLPDLS SMLSKVYINE VDISKIHQSQ KVTMGLDAFP EVKMEGVVKT
VANIGETRPG ATAKVFEVNI KLNKVDSILK PGMTTSNNIL ISEVPKKLII PLEAVFAEGK
TSFVYLRKSG NISKQQVTLG KSNDEEVIVE KGLTEGDVVY LSEPESAKET KITTLK
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