Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_7068 |
Symbol | |
ID | 8363260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8844524 |
End bp | 8845327 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644969201 |
Product | hypothetical protein |
Protein accession | YP_003126670 |
Protein GI | 256426017 |
COG category | [R] General function prediction only |
COG ID | [COG1073] Hydrolases of the alpha/beta superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAGCA AGCTGAAACT AAAACCTATA CTTTCCGCGA TCCTGGGGCT TTACCTGGTG ATCGGCGTAT TGCTGACCTT ATTCCAGAAA AAGTTCATCT TTCATCCGGA ACCGCTGGAG GCGAGTTATG TCTTCAAATA CGACATTCCA TTTGAAGAAA TCAGCATCCG TATCAATGAG AAACAGACGC TGAGCGCCAT GCTGTTTAAG GCAGATCAGC CGAAAGGTAT GGTAATATAC TTTCATGGGA ATGCCCGTAA TATTTCCAAA TATGGAAATA AGGCCAGATT GATGCTGAAA CGCGGCTACA GTGTGTTGAT GATGGATTAT CCTACTTATG GAAAAACCAC CGGCAAACTG ACCGAAACGA CGATCTACGA CAACGCCCTG CATATGTATG AGGTAGCCCG GAAGTTTTAT CCACCGGACA GTATTATCAT TTACGGAAGA TCACTGGGGA CGGCAGTCGC TGCCCAACTG GCAGCTGTCC GCGATTGTAA ACGACTGGTG CTGGAAGCTC CGTATTTCAA CATGACAGAG ATGGCAATGC GTTTGGTACC GCTTTACCCT TACGCGTATA TGCTCGATTT CAAGTTCCCG ACAAATGAAT ACCTGCCCAA AGTAACAGCG CCTGTTGTCA TCATTCATGG TACGGATGAT AAGACAATAC CGGTTGAATC AGGGAAGAAA CTGGAGAAGC TGTTCAAAAC AGGCGACCAG TTTATAACTA TACCCGGCGC GGATCACAAT AACCTGGAGA AATATCCTGA CTATCTGAAA GCGTTAGATG TCGCGTTGCG ATAA
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Protein sequence | MFSKLKLKPI LSAILGLYLV IGVLLTLFQK KFIFHPEPLE ASYVFKYDIP FEEISIRINE KQTLSAMLFK ADQPKGMVIY FHGNARNISK YGNKARLMLK RGYSVLMMDY PTYGKTTGKL TETTIYDNAL HMYEVARKFY PPDSIIIYGR SLGTAVAAQL AAVRDCKRLV LEAPYFNMTE MAMRLVPLYP YAYMLDFKFP TNEYLPKVTA PVVIIHGTDD KTIPVESGKK LEKLFKTGDQ FITIPGADHN NLEKYPDYLK ALDVALR
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