| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7062 |
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| Symbol | |
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| ID | 8363254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8835910 |
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| End bp | 8838309 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644969195 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
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| Protein accession | YP_003126664 |
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| Protein GI | 256426011 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAC ACATTAACAA GGTGGCTGTT TTAGGTTCAG GAGTAATGGG TTCAAGAATA
GCAGCCCATT TCGCAGGCGT AGGAGTACAG GTTTTGTTAC TGGATATTGC CCCCAAAGAG
TTAACTGATG CAGAAAAAGC TAAAGGGCTG TCACTTGACA GCAAAGCGGT AAAAAACCGC
ATCGTAAACG ACGCATTACA GTCTGCCCTG AAAGCAAACC CTTCTCCGGT GTACAACAAG
GACGTGGTAA AGCTGATCCG TACCGGCAAC TTTACAGACG ATATGAAGGA GATTGCCAAC
TATGACTGGA TCATTGAGGT TGTGGTGGAA AATCTGGACG TCAAAAAGTC TGTTTTCACG
GAAGTGGAAA AGTACCGTAA ACCAGGTACC CTGATTACTT CCAACACTTC AGGTATTCCT
ATTCACCTGA TGGCGGAAGG CCGCAGCGAT GATTTTAAGC AACATTTCTG TGGTACCCAC
TTCTTTAACC CTCCGCGCTA TCTGCGCTTA CTGGAAATCA TTCCCACACC GCATACTGAC
CCGGAAATCG TGGATTTCCT GATGCATTAC GGAGATCTGT ACCTGGGTAA AACCACGGTA
CTCTGTAAGG ATACGCCCGC ATTTATTGCC AACAGGGTAG GGGTGTATTC TATCATGGCG
ATTTTCCACA TCATGCAGGA AATGCAGCTG AATATAGATG ATATCGATGC GCTGACCGGC
CCGGTAATCG GCAGACCAAA ATCTGCTACT TTCCGTACAG CCGATGTCGT GGGGATCGAT
ACACTGGTGA GAGTAGCAAA AGGTGTGGCA GAGAACTGTC CGCAGGATGA AGCAAAGGAT
ATCTTCGTGA TCCCTCCGTT CCTGCAAAAA GTAGTGGAAA ACAAATGGTT GGGCGATAAG
ACCGGCCAGG GTTTCTATAA AAAGACCAAA GGAGAAGGCG GTAAGGAAAT ACTGACGCTC
AACCTGGAAA CGATGGAATA TGGTCCCCGT CAGAAATCTA AATTCGCAAG TATTGAAGCG
GCCAAGCAGG TGGAAGACCT GAAGCAGCGG CTGCGTGGAT TGTTTACTGC GGGCGACAAA
GCCGGTCAGT TCTATCAGCA GTTCCACGCT TATCTGTTCT CTTATATTTC TCACCGTATT
CCTGAGATCG CGGATGATAT CTATAAAGTG GACGATGCGA TGAAAGCTGG TTTCGGATGG
GAGATCGGCG CTTTTGAATC ATGGGATGTG CTGGGTGTGG AAAACGGTAT CAAAGCCATT
GAAGCGAAAG GATTAAGCGT AGCGCCATGG GTAAAGGAAA TGCTGGAGAA AGGTATGAAG
AGCTTCTACA AAATAGAAGC GGGCAAGAAA TATTACTACG ATGTAAAATC ACACGTTTAT
AAACTGCTGC CTGGTGCAGA TACATTCGTT ATCCTGGAAA ATCTTTCCGG TAATGTGGTG
TGGAAAAACA GTGCATGTAC CCTGTATGAT ATCGGAGACG GTGTGGTTAC CATCGACTGG
AAAACTAAAA TGAACACCAT CGGGGGCGAA GTGCTGGAAG GTGTGAATAA AGCGATTGAT
AGGGCGGAAA AAGACTTCCG CGGACTGATC ATCGGCAATG AGGGCGCTAA CTTCTCAGCC
GGTGCAAATG TGGGGATGAT CTTCATGTAT GCGGCAGAAC AGGAGTATGA TGAACTGGAC
ATGGCTGTAC GTATGTTCCA GAAAACAACC ATGCGTCTGC GTTATTCTTC CATTCCGGTG
ATTGTAGCGC CACATGCGCT GACACTGGGA GGTGGTTGTG AAATGTGTCT CCATGCCGAT
AAGGTACAGG CAGCGGCGGA ATCGTATATC GGACTGGTGG AACTCGGTGT AGGCCTGATC
CCTGGTGGTG GCGGTACCAA AGAAATGGCA CTGCGCGCCA GCGATGAATT CAAAGAAGGC
CGTATTGAAG AGGAGCCACT GAAAGATCGT TTTATGGCGA TTGCCATGGC GAAAGTGAGC
ACTTCTGCGC AGGAAGCCTT TGACCTGGGC GTTTTGCGCA AAGGACATGA CGAGATCACA
TTGAATCAAA GCCGCCTGAT CGCTGATGCA AAACGCAGCG TATTACAACT GGCAGATGAA
GGCTATACCC GTCCGGTAGA GAGGAAGGAT GTAAAAGTCC TGGGCCGTGC CGCACTGGGG
ATGTTGCTGA CCGGTATTCA CAGTATGCGT TTTGCTAACT ACATATCAGA GCACGATGCG
AAAATAGCCG GTAAACTGGC CTATGTAATG AGTGGGGGAG ATCTCTCAGA AGCCTCACTC
GTGAGCGAAC AATATCTGCT CGACCTGGAG AGGGAAGCAT TCCTTAGCCT CGCCGGTGAG
CGTAAAACCC TGGAAAGATT GCAGAGTGTG ATCAAAACAG GCAAACCAAT CAGAAATTAA
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| Protein sequence | MKRHINKVAV LGSGVMGSRI AAHFAGVGVQ VLLLDIAPKE LTDAEKAKGL SLDSKAVKNR
IVNDALQSAL KANPSPVYNK DVVKLIRTGN FTDDMKEIAN YDWIIEVVVE NLDVKKSVFT
EVEKYRKPGT LITSNTSGIP IHLMAEGRSD DFKQHFCGTH FFNPPRYLRL LEIIPTPHTD
PEIVDFLMHY GDLYLGKTTV LCKDTPAFIA NRVGVYSIMA IFHIMQEMQL NIDDIDALTG
PVIGRPKSAT FRTADVVGID TLVRVAKGVA ENCPQDEAKD IFVIPPFLQK VVENKWLGDK
TGQGFYKKTK GEGGKEILTL NLETMEYGPR QKSKFASIEA AKQVEDLKQR LRGLFTAGDK
AGQFYQQFHA YLFSYISHRI PEIADDIYKV DDAMKAGFGW EIGAFESWDV LGVENGIKAI
EAKGLSVAPW VKEMLEKGMK SFYKIEAGKK YYYDVKSHVY KLLPGADTFV ILENLSGNVV
WKNSACTLYD IGDGVVTIDW KTKMNTIGGE VLEGVNKAID RAEKDFRGLI IGNEGANFSA
GANVGMIFMY AAEQEYDELD MAVRMFQKTT MRLRYSSIPV IVAPHALTLG GGCEMCLHAD
KVQAAAESYI GLVELGVGLI PGGGGTKEMA LRASDEFKEG RIEEEPLKDR FMAIAMAKVS
TSAQEAFDLG VLRKGHDEIT LNQSRLIADA KRSVLQLADE GYTRPVERKD VKVLGRAALG
MLLTGIHSMR FANYISEHDA KIAGKLAYVM SGGDLSEASL VSEQYLLDLE REAFLSLAGE
RKTLERLQSV IKTGKPIRN
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