| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7055 |
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| Symbol | |
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| ID | 8363247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8828577 |
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| End bp | 8831105 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644969188 |
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| Product | glycoside hydrolase family 2 sugar binding |
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| Protein accession | YP_003126657 |
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| Protein GI | 256426004 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0167983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGCGC AGATGACGTA TGCGCAGACA ACAGCAACGC TCTCACTGAA CGGAGAATGG
GAATTCGCAG ATGCAGATGA CAGCATCTGG CGAAAGGCAA TTGTGCCCGG TACCGTGCAT
ACCGATCTGC TGGCGCATCA CCTGATACCG GATCCATTTG TGGGCATGAA TGAAAAGGCG
GTACAATGGG TGGATAAAAA GGACTGGATT TACCGTAAAA GTTTTGAAGT ATCTGCGTCA
TTGCTCGGGC ATGATGTGAT CGATCTGCAA TTACCGGAGC TCGATACGTA TGCAGACGTC
TATATCAATG ATCATCTTGT ATTGCAGGCG CATAATATGT TTGTCGGTCA CCAGATCAAT
GTGAAACAAT GGCTGCGTAG CGGACAGAAT CAGTTGCGCG TTTTCTTTCA TAGCCCTGTT
CGTTATGATA TGGAACGTTT CCTGAAAGAC AGGCTGATCT ATCCTGCAGG TAATGATGCG
AGTGATATTC CTTTGAGTAT CTATGCACGT AAGGCGCCTT ATCATTATGG ATGGGACTGG
GGACCAAGAC TGGTTACTTC CGGTATCAGC GGAGGAGCAT TACTGAGCGC CTGGAATAAA
ACAAACATCA GTGATGTATG GCTGCAACAG CAAAGTCTGA CAGACCAGAC AGCTGTCATA
AAGGCTGCAT TGACACTGGA AACGGTACAG GCAGGAAAAT ATACCCTGCG TATAGAGAGT
CCCGATAATT TGTTTAAAAC AGTGGCTGTT GAGAAAGGTT TGAATGCTGG TCGGCAGACA
CTGGAACTAC CGTTTAACAT TCAGCGTCCC AGGCATTGGT GGCCTAACGG ATTGGGTGAA
CCGTTCCTGT ACAAAGTGAA AGTAAGTATA TTGGAAGGCA GGGAGCTGGT TGGAACGCGT
TTGCTGAATA TCGGACTGCG GACAGTAGAA GTGATCAATG CACTTGATAG TCTGGGAGAG
AGTTTTTATG TAAAGGTGAA TGGACAGCCG GTATTTATGA AAGGCGCTAA TTATATTCCA
CAGGATAATT TCCGGCCAAG GGTCACAGAC GAGCGGTATC AGCAGCTGTT TAAGGATATG
AAAGAGTCGC ATTTCAATAT GGTGCGAGTA TGGGGTGGCG GCGCTTATGA GAAGGACTTG
TTTTATGAGC TGGCAGATCA GCAGGGGATA CTGGTATGGC AGGACTTTAT GTTTGCCTGT
ACGGTGTATC CGTCAGATAC AGCTTTCCTG GCCAATGTAA AAGAAGAACT ACGTTATAAT
ATCACCCGTT TGCGTAATCA TGCGTCGCTT GCTTTGTGGT GTGGGAATAA TGAGGTGGCT
GTTGCTATTA AAAACTGGGG ATGGCAGAGT GGCTATGGTT ATACTGAAGG ACAGTGGAAG
ACCTTGCAGC AGGGATATGA TGTACTGTTT AAATCGTTGT TGCCGGAGCA AGTAAATGCA
TTGGATCCGG GCAGGTTTTA TTTCCATTCA TCACCGGTTA GTAACTGGGG CACGAAGCAG
GATTTTACCA AAGGAGATAA TCATTATTGG GGCGTATGGC ATGGTATGGA ATGGTTTGAA
GCCTTTAATA CGCATGTACC GCGTTTCATG AGTGAGTACG GTTTCCAGTC ATTCCCGGAT
ATTCATACCA TCCGTCGTTT TGCCGGAAAG AATGACCAGG ATATTTATTC TCCGGTGATG
TTATCTCACC AGAAAAGTAC CAACAGGGGC AATGCCGCTA TTAACACTTA TCTGCAACAT
TACTATAAAA CACCAAAGGA TTTTGCATCG CTGATATATG TGAATCATGT GTTGCAGGCG
GAGGGTATAC GCATCGCTAT AGAAGCGCAT CGCCGTGCTA TGCCATACTG TATGGGTACA
TTATACTGGC AATTGAATGA TTGCTGGCCT GGTCCGTCCT GGTCAGGCAT TGATTACTAT
GGCAGATGGA AAGCCCTGCA ATATTTTGTG AAGAAGGCAT TTGCACCGGT AATTGTTTCC
CATGTGGAGG TACATGATAA ATTGCAGACC TGGGTAGTCT CGGATGTACC ACAGGAGCAG
CCATTGACGC TGGAAATGCA GTTAACAGAC CTGGAAGGAA AAGTATTATG GGAAAAATCA
GTTGCTGGTA TTCAGCCGAA GGCCGCACAG AGCCAGTTGC TGTATGAAGT ACCTGTAAGC
GAATTACTGA AGGGCTTTGA TGCACAAAAG GTAATATTCT ATTCGAAAGT GGTAAAGAAA
GGTAAGCTAT TAACCCGGAA TGTGTATTAC TTTGCCAAAG CCAGCACTAT GGAACTGCCG
GATCCCGGTA TTCAGACGAG CGTTACGACG GGTGCTGATG GAACGATAGC TGTGAAGATC
ACTGCCGGCA AACTGGCAAG AAATGTTTAC CTGCTGTTAG AGAACGATCC GACGTCACAG
TTCAGTGATA ACTATTTTGA CCTGCTGCCG GGAGAAACAG CTACCGTGCG TATAAACAGT
GAATTGACAT TACAACAGGT AAAAGAACAG CTGAAAGTTA TAAGTCTCAG AGATACATTT
AAAAATTAA
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| Protein sequence | MLAQMTYAQT TATLSLNGEW EFADADDSIW RKAIVPGTVH TDLLAHHLIP DPFVGMNEKA
VQWVDKKDWI YRKSFEVSAS LLGHDVIDLQ LPELDTYADV YINDHLVLQA HNMFVGHQIN
VKQWLRSGQN QLRVFFHSPV RYDMERFLKD RLIYPAGNDA SDIPLSIYAR KAPYHYGWDW
GPRLVTSGIS GGALLSAWNK TNISDVWLQQ QSLTDQTAVI KAALTLETVQ AGKYTLRIES
PDNLFKTVAV EKGLNAGRQT LELPFNIQRP RHWWPNGLGE PFLYKVKVSI LEGRELVGTR
LLNIGLRTVE VINALDSLGE SFYVKVNGQP VFMKGANYIP QDNFRPRVTD ERYQQLFKDM
KESHFNMVRV WGGGAYEKDL FYELADQQGI LVWQDFMFAC TVYPSDTAFL ANVKEELRYN
ITRLRNHASL ALWCGNNEVA VAIKNWGWQS GYGYTEGQWK TLQQGYDVLF KSLLPEQVNA
LDPGRFYFHS SPVSNWGTKQ DFTKGDNHYW GVWHGMEWFE AFNTHVPRFM SEYGFQSFPD
IHTIRRFAGK NDQDIYSPVM LSHQKSTNRG NAAINTYLQH YYKTPKDFAS LIYVNHVLQA
EGIRIAIEAH RRAMPYCMGT LYWQLNDCWP GPSWSGIDYY GRWKALQYFV KKAFAPVIVS
HVEVHDKLQT WVVSDVPQEQ PLTLEMQLTD LEGKVLWEKS VAGIQPKAAQ SQLLYEVPVS
ELLKGFDAQK VIFYSKVVKK GKLLTRNVYY FAKASTMELP DPGIQTSVTT GADGTIAVKI
TAGKLARNVY LLLENDPTSQ FSDNYFDLLP GETATVRINS ELTLQQVKEQ LKVISLRDTF
KN
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