| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7054 |
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| Symbol | |
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| ID | 8363246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8827117 |
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| End bp | 8828574 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644969187 |
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| Product | Alpha-L-fucosidase |
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| Protein accession | YP_003126656 |
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| Protein GI | 256426003 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3669] Alpha-L-fucosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000348467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAAAC TATTTGTATT ATTTAGCAGT GCATTACTGG CGTTTTCCAC GGCCAATGCG
CAGGATCATG GCCTTGGGCA ACCCTATATC CCTGAAACGG ATAAAGCCGT ATTGCAGAAA
CTGGACGAAT GGCAGGACTG GAAATTTGGT ATGATTATCC ATTGGGGAGC GTATTCTCAG
TGGGGTGTGG TAGAATCCTG GAGCATTTGT CCGGAAGATG AAGGCTGGAC ACAGCGCAAT
CCCTATGGCA TTCCTTACTA TGATTATGTG AAGAAATACG AAGCACTGTC TACCACTTTC
AATCCGACCA AATTTGACCC TTCCAAATGG GCTAAAGCGG CGAAAGGCGC AGGGATGGAA
TATGTAGTAT TCACTACCAA ACACCACGAC GGTTTCTGTA TGTGGGATAC CAAACAGACG
GACTACAGCA TTGCGGGACC GAACAGTGCT TTCCGTAATG ACCCGAGAAA GAACGTAGCA
AAAGAAGTGT TCAGTGCTTT CCAGAAAGAA GGTATTCACA CAGGTGCTTA TTTTTCCAAA
CCTGACTGGC ACAGTGAGTA CTACTGGTGG TCTTATTTCC CACCGAAGGA CAGACACGTG
AACTATGATG TGAATAAGTA TAAAGACCGC TGGAATAATT TCAGGGACTT TACTTACAAA
CAGATCGAGG AACTGATGAC CACTATGGGT AAGATTGAGA TCCTCTGGCT GGATGGCGGC
TGGGTACGTG CACGTAAACA GGATAACAAA AAAGAGAACG ACATTACGGC AGCTGAAATT
GATACCAGAC CAAGCAAGCA GAATGAAGAT ATCGATATGG CAGGCATCAC AAAAATGGCG
CGTAGCCATC AGCCGGGTCT GATCGTAGTA GACCGTGCGG TACATGGTCC GTTTGAGAAC
TATCGTACAC CTGAGCAGCA GATCCCTGAC AAACCATTGT CTTATCCATG GGAAACCTGT
ATGACGATGG CAAACTCCTG GTCATATGTA CCAGATGATA AATACAAGTC TGTAAATAAG
CTCATTCATA ACCTGGTGGA TATCGTAGCG AAGGGCGGTA ACTACCTGCT GAACGTAGGT
CCTGGTCCTG ATGGACAGTT ACACGAGGAG GCTTACACCA CGATGACTGC TATCGGTGAG
TGGATGAAGG TGAATGGCGA TGCGATCTAT GGTACGCGTT CAGTGGCGCC TTATAAAGAT
GGAAAGGTAT GTTTTACCCG TAAGAAGAAT GGTAATGTAT ATGCGATCTA TATGCTGGAA
GAAGGTGAAA AGCTGCCTGC ACAGGTAGCC TTTAACGGAA TGAAACCAGC GAAAGGCGCT
AAAGTAACGG TATTGGGAGC GAAGGAGAAA ATCTCCTGGA AAGCTACCGC TACAGGTACT
CAGCTGACTA TCCCTGCGGC TGTGCAGCAG AAAGCATGGC AACATGCAGT AGCAATACAG
ATCTCTGCAG TAGAGTAA
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| Protein sequence | MRKLFVLFSS ALLAFSTANA QDHGLGQPYI PETDKAVLQK LDEWQDWKFG MIIHWGAYSQ
WGVVESWSIC PEDEGWTQRN PYGIPYYDYV KKYEALSTTF NPTKFDPSKW AKAAKGAGME
YVVFTTKHHD GFCMWDTKQT DYSIAGPNSA FRNDPRKNVA KEVFSAFQKE GIHTGAYFSK
PDWHSEYYWW SYFPPKDRHV NYDVNKYKDR WNNFRDFTYK QIEELMTTMG KIEILWLDGG
WVRARKQDNK KENDITAAEI DTRPSKQNED IDMAGITKMA RSHQPGLIVV DRAVHGPFEN
YRTPEQQIPD KPLSYPWETC MTMANSWSYV PDDKYKSVNK LIHNLVDIVA KGGNYLLNVG
PGPDGQLHEE AYTTMTAIGE WMKVNGDAIY GTRSVAPYKD GKVCFTRKKN GNVYAIYMLE
EGEKLPAQVA FNGMKPAKGA KVTVLGAKEK ISWKATATGT QLTIPAAVQQ KAWQHAVAIQ
ISAVE
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