| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7038 |
|---|
| Symbol | |
|---|
| ID | 8363230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 8801978 |
|---|
| End bp | 8804749 |
|---|
| Gene Length | 2772 bp |
|---|
| Protein Length | 923 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644969171 |
|---|
| Product | peptidase M14 carboxypeptidase A |
|---|
| Protein accession | YP_003126640 |
|---|
| Protein GI | 256425987 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.268062 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATATA CCTTCAAGGG CTGGTTGCTG ATGGCTGGCA TGATTGCCCA TTCAGCTTTA
CAGGCCCAGA CCGTGCCATC ACCCAAGCAA CATTTCGGTT TTAATATCGG AGATGATTAT
CAGCTGGCCA CTTATACACA AACGGCTGCT TATTTTCAGC AACTGGCAGC ATCCGACAGG
GTGAAGCTGA CAGATATCGG TCTTACAGAA GAAGGCCGGC ATCAGTATAT GCTGGTGATC
TCTTCTCCTG CCAATATCAA ACAACTGGAT CAGTATAAAA AGATTTCGCA GCAACTGGCC
AGGGCGGAAG GTTTGACGCC TGCGCAGGCA AAGGAGTTGT CAGAGAAAGG AAAGGCTGTT
GTATGGATCG ATGGTGGTTT ACATGCGACG GAAGTCGTAG GCACACATCA GCTGATAGAA
ACTGCCTGGC AGCTGATCAG CAGGAATGAT CCTGAAACGA TGCGTATACT CGATAACGTG
ATCATACTCA TGACACATGC GAATCCTGAC GGACAGGAGC TGACGAGTAG CTGGTATATG
CGCAATGCAG ATACCCTGAA ACGTTCAACA GATCAATTAC CCGTGTTATA TCAGAAGTAT
ATAGGGCACG ATAACAATCG TGATTTCTAT ATCATGAACA TGAAAGAAAG CGCCAACATG
GGAAAACAAT TATTCCTGGA GTGGATGCCG CAGATCATGT ACAATCATCA CCAACGCGGG
CCGGAAGGTT CTGTACTGGC AGGACCTCCG TATCGCGACC CTTTCAACTA TTTCTTCGAT
CCGCTGATGA TTACAGGTAT CGATGCACTG GGTGCAGCGA TGTATAACCG TCTGAATGTG
GAGGATAAAC CTGGTTATAC GCGACTGAAT GGTTCGAGTT TTTCTACCTG GTATAACGGC
GGACTTCGTA CAACAACGCA GTATCATAAT ATGATAGGTT TGCTGACGGA GATCATTGGT
AATCCGACAC CTGAGAAGAT ACCGGTAGTG CCACAGCGCC TGATTCCTAA CGGGGCAACG
CCAAATCCGG TAAGACCAAC AGGGGACTGG CGCTTCAGAA GATCCATTGA TTACTCTGTA
TCATTGAACT ATGCTGTGCT GGATTATGCA GCCCGTCAGC GGGATGAGGT ATTGTTCAAT
ATCTATAAGA TGGGTAAGAA TGCGATTGAT AAGGGTAATA CAGATTCCTG GACATTATCA
CCTAAGAGAG CTGACGCGAT TACTGCTGCC TATAAAAAGG CGCAGAATGA TACGACTAAA
GATGATGGCA GTGATCCATA TGGCTGGATG AGAAGAGGCA GTAATATTGG TATGGAGTAT
TATGATGCGG TGTACAGGAA TCCTGCGGAA AGAGATCCGC GGGGCTATGT TATTCCTGCC
GATCAGCCGG ATTTTGCCAC TGCTGTGAAG TTTGTGAATG CCCTGATTAA AGCAGGCATT
GGTGTACAGA AGGCGTCGGC CGCTTTTATA GTAGCAGGGA AACAATATCA GGCGGGGTCT
TATATCGTAA GGACGAATCA GGCTTTTCGT CCGCATGTGC TGGATATGTT TGAACCACAG
GATCATCCTA ATGACTTCCA ATATCCGGGA GGTCCACCTG TTCGTCCTTA TGATGCGGCA
GGATGGACCC TCGCTTTCCA GATGGGCGTA AAATATGACC GTGTACTGGA TGATTTCAGC
GGACCGTTTG AGAAACTGCC TTACGGGGAG TTGCAATCGC CGGCTGTTTT ATCCTTTACA
CCGGCTACCG GTGGCGGTTA TCTGTTGAGT GCCCAGGTGA ATAATGCGTT TATAACGGTG
AATGACCTGA TGAAAGCAGG TGTGAAGGTG TACCGTTTGC CGGAGGGACA GGATGGTATG
GGGCCAGGTA CTTTTTTTGT GCCGGCGGGA GCACAGGCGA ATAGTATCCT GAAAACCGCC
GCTGCGCAAT GGGGCGTAGC CGCCAAAGCA GTGAGCAAGC GTCCAAAAGG CGCTACGGAA
GCTACCCCTT TGCGCATTGC GTTGTGGGAT AACTATGGAG GGTCTATGCC GTCAGGTTGG
ATCCGCTGGA TGATGGAGCA GTATCATTTC CCTTTCAGCC TGGTTTATCC GAAGGATATA
GATGGGGGTA ACCTGAAGCA GCGTTATGAT GTGATCGTGT TTGTAACAAG GGCGATTCCG
CCGGTAGGGG GAGAGGATAA TAACAGGAAT GCTTATCGGC AGACGCAGCC TGCTGCGGCT
GATATCCCGG AGCAATACCG GAATATGTTG GGTAAGATCT CAAAAGATAC ATCCATTCCT
AAACTGAAGG AGTTCCTGGA AGCAGGCGGT ACAGTGATTA CGATTGGCAG TAGTACCAAT
CTGGCTTATC ATCTGGCTTT ACCTGTGCAT AATGCCTTGG TAGAGAAGGG GAAAGATGGT
AAAGAGACCC CTTTGCCGGG AACGAAGTAT TTCGTGCCGG GCAGCATTTT ACAGGTGACG
TTTGACAGCA CGCAGTCTGC CGCCTGGGGT ATGCCGGCTG TAGGCGATGT GAATTTTGAT
AATAGTCCGG TATTCCGGCT GGACAGTGAT GCTGCTTCCA GGGGGGTACA TCCGATTGCC
TGGTTTACCA CGGATAAGCC TTTGCGTAGC GGATGGGCCT GGGGACAATC TTACCTGAAG
GATGGCGTGG CTGCTTTTGA GGCGCCGGTA GGCAGGGGGA AGCTCTATGC CTTTGGTCCG
GAAATAACTT TCCGCGGGCA GTCACATGGC ACTTTTAAGC TATTGTTCAA TGGTTTGTAC
GGACAAAAGT AA
|
|---|
| Protein sequence | MRYTFKGWLL MAGMIAHSAL QAQTVPSPKQ HFGFNIGDDY QLATYTQTAA YFQQLAASDR
VKLTDIGLTE EGRHQYMLVI SSPANIKQLD QYKKISQQLA RAEGLTPAQA KELSEKGKAV
VWIDGGLHAT EVVGTHQLIE TAWQLISRND PETMRILDNV IILMTHANPD GQELTSSWYM
RNADTLKRST DQLPVLYQKY IGHDNNRDFY IMNMKESANM GKQLFLEWMP QIMYNHHQRG
PEGSVLAGPP YRDPFNYFFD PLMITGIDAL GAAMYNRLNV EDKPGYTRLN GSSFSTWYNG
GLRTTTQYHN MIGLLTEIIG NPTPEKIPVV PQRLIPNGAT PNPVRPTGDW RFRRSIDYSV
SLNYAVLDYA ARQRDEVLFN IYKMGKNAID KGNTDSWTLS PKRADAITAA YKKAQNDTTK
DDGSDPYGWM RRGSNIGMEY YDAVYRNPAE RDPRGYVIPA DQPDFATAVK FVNALIKAGI
GVQKASAAFI VAGKQYQAGS YIVRTNQAFR PHVLDMFEPQ DHPNDFQYPG GPPVRPYDAA
GWTLAFQMGV KYDRVLDDFS GPFEKLPYGE LQSPAVLSFT PATGGGYLLS AQVNNAFITV
NDLMKAGVKV YRLPEGQDGM GPGTFFVPAG AQANSILKTA AAQWGVAAKA VSKRPKGATE
ATPLRIALWD NYGGSMPSGW IRWMMEQYHF PFSLVYPKDI DGGNLKQRYD VIVFVTRAIP
PVGGEDNNRN AYRQTQPAAA DIPEQYRNML GKISKDTSIP KLKEFLEAGG TVITIGSSTN
LAYHLALPVH NALVEKGKDG KETPLPGTKY FVPGSILQVT FDSTQSAAWG MPAVGDVNFD
NSPVFRLDSD AASRGVHPIA WFTTDKPLRS GWAWGQSYLK DGVAAFEAPV GRGKLYAFGP
EITFRGQSHG TFKLLFNGLY GQK
|
|---|
| |