Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6979 |
Symbol | murC |
ID | 8363171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 8740738 |
End bp | 8742129 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644969112 |
Product | UDP-N-acetylmuramate--L-alanine ligase |
Protein accession | YP_003126581 |
Protein GI | 256425928 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0152734 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000000420248 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATCTGA ACAAAATAAA ACGCATCTAC TTCATTGGCA TAGGAGGCAT CGGCATGAGC GCTATTGCAC GCTTCTTTAA TGAGAAGGGT ATGCAGGTAA GCGGTTATGA CCGTACCGAA ACGGCGCTCA CACGCCAGCT GGCAGAAGAA GGCATGCAGA TCCACTATAC AGATGATGTA CAGCTGGCCG ACCAGCAGGC TGACCTGATC GTGTACACAC CCGCTATACC TGCTTCGCAT ACAGAACTGA TCTGGTTCCG TGAGAAAGGC TTCGAAGTAG TAAAACGTAG CGACGTATTA CAGGAGATCA CCAAAGAATT ATACGCGATC ACCGTTGGAG GTACACATGG TAAAACTACC ACCTCTACCC TGATCGCTCA TATACTCAGA CACACCGGTT ACGGCTGTAA CGCTTTCCTC GGAGGTATCA GCGCCAACTA TGACCGTAAC TTCTGGAGCA GCGACAAACA GGTAGCTGTA ATAGAAGCCG ACGAATATGA CCGTTCATTC CTGAAGCTGC ATCCCGATGT GGCAGTACTG ACTGCCATTG ACGCAGATCA CCTGGATATT TACGGTACAG AAGAAGAAGT ACAGGAAGCA TTTATACAGT ATACCCGCAA CATCAAAGCA AAAGGCACAC TGGTGGCAAA GCAGGGACTA CACCGCGCAG CAGAACTGAA AGGGGACAAT CACATATGGT ATCACCTGGA AGACAACAAA GCTGACATAT ATGCAGCCAA TATACGCCCG GATGAAGGTG GATACAGATT TGATGTAATA CAGCACAACT GGACACTGAC AGACATCTAC CTTCCGATCG GCGGTACACA CAACATCGAG AATACAGTAG CAGCAATTGC AGTAGCACAC CTGTTAGGTA TTGCAGATGA AAAGATCAAA GCAGCAATCG CTGACTTCAA AGGCATCAAA CGTCGCTTTG AATACCTGGT GAAAAATGAT TACCAGATAT ACATCGACGA TTATGCACAT CACCCGGAAG AACTGCGCGC ACTTATTAGC AGTGCTCGTG CGTTATTCCC TGACAGAAAA TGTGTCGTGC TGTTTCAGCC TCACCTGTAC ACACGCACAC GCGACTTTGC AACAGGGTTT GCAGAGAGCC TGTCACTGGC GGATGAAGTA CTGCTGCTGC CAATCTATCC CGCACGTGAA CTGCCTATAG AAGGTGTACA CAGCGAGATG ATTGCAAAGA TGATCACAAA ACCCGTTCAG GTAATCCGGA AAGAAGACGT GCTCTCCTGG GTAAAAGCGA ACAGCGCACC ACTATTTATC ACAGCAGGCG CCGGAGACAT CGATCAGTTC CGCGAGCCCG TTGAAGAAGT GCTGAACGGA AAAGGCATCG TAGAAAACGA AGAAGTAAAA AAGAAAGCTT AA
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Protein sequence | MDLNKIKRIY FIGIGGIGMS AIARFFNEKG MQVSGYDRTE TALTRQLAEE GMQIHYTDDV QLADQQADLI VYTPAIPASH TELIWFREKG FEVVKRSDVL QEITKELYAI TVGGTHGKTT TSTLIAHILR HTGYGCNAFL GGISANYDRN FWSSDKQVAV IEADEYDRSF LKLHPDVAVL TAIDADHLDI YGTEEEVQEA FIQYTRNIKA KGTLVAKQGL HRAAELKGDN HIWYHLEDNK ADIYAANIRP DEGGYRFDVI QHNWTLTDIY LPIGGTHNIE NTVAAIAVAH LLGIADEKIK AAIADFKGIK RRFEYLVKND YQIYIDDYAH HPEELRALIS SARALFPDRK CVVLFQPHLY TRTRDFATGF AESLSLADEV LLLPIYPARE LPIEGVHSEM IAKMITKPVQ VIRKEDVLSW VKANSAPLFI TAGAGDIDQF REPVEEVLNG KGIVENEEVK KKA
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