| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6954 |
|---|
| Symbol | |
|---|
| ID | 8363146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 8716390 |
|---|
| End bp | 8717283 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644969087 |
|---|
| Product | malonyl CoA-acyl carrier protein transacylase |
|---|
| Protein accession | YP_003126556 |
|---|
| Protein GI | 256425903 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
|---|
| TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.880714 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACACG CTTACGTTTT TCCAGGACAG GGTTCTCAGT TCCCGGGTAT GGGCAAGAAT
CTGTACGATA GCAATCCAAA GGCAAAAGCA CTTTTTGAGA AAGCTAATGA GATATTAGGG
TTCCGTATAT CAGATGTAAT GTTTACCGGT ACTGAAGAGG ACCTGAAACA GACCAAAGTG
ACACAACCTG CTGTGTTCCT GCACAGTGTG ATCGCTTTTC TGTGCGCAGA ACCTGCTGCA
CAGCCGGACA TGGTAGCAGG TCACTCCCTG GGTGAATTTT CCGCCCTGGT AGCCAATGGT
ACCCTCACAT TTGAAGATGC TTTGCGCCTG GTATTTATCC GTGCTACGGC CATGCAGAAA
GCCTGCGAAC TGCAGCCATC CACTATGGCG GCTGTACTGG CACTGGACGA TGCGAAAGTA
GAAGAGATCA GTGCTGCGGT GAGCGCAGAA ACCGGAGAAG TAGTGGTAGC GGCTAATTAC
AACTGTCCTG GTCAGCTGGT AATTTCCGGT TCTATCAAGG GTATTGAGGT CGCTTGTGAG
CAAATGAAGG CGGCTGGTGC AAAAAGAGCG CTGGTACTGC CGGTAGGTGG TGCATTCCAC
TCTCCGCTGA TGGCCCCTGC AAAAGAGGAG CTGAAAGCGG CTATTGACAA GACAACTTTC
AGTCAGCCAT CCTGCCCGGT ATACCAGAAC GTGGTAGCTA AGGCGGTAAA CGATCCTGCT
GAGATCAAAC AGAACCTGAT CGATCAGCTG ACTGGCGCTG TACGCTGGAC ACAGTCTGTA
CAGGCGATGG TAGCTGATGG TGCAACAACA TTTACAGAAG TTGGTCCGGG TAAGGTATTA
CAGGGTCTGG TGGTGAAGAT CCAGAAGGAT GCTGTAGTGA ACGGAATCAA TTAA
|
|---|
| Protein sequence | MKHAYVFPGQ GSQFPGMGKN LYDSNPKAKA LFEKANEILG FRISDVMFTG TEEDLKQTKV
TQPAVFLHSV IAFLCAEPAA QPDMVAGHSL GEFSALVANG TLTFEDALRL VFIRATAMQK
ACELQPSTMA AVLALDDAKV EEISAAVSAE TGEVVVAANY NCPGQLVISG SIKGIEVACE
QMKAAGAKRA LVLPVGGAFH SPLMAPAKEE LKAAIDKTTF SQPSCPVYQN VVAKAVNDPA
EIKQNLIDQL TGAVRWTQSV QAMVADGATT FTEVGPGKVL QGLVVKIQKD AVVNGIN
|
|---|
| |