| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6918 |
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| Symbol | |
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| ID | 8363110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8666731 |
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| End bp | 8667861 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644969051 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_003126520 |
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| Protein GI | 256425867 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.625358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.464203 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTTTG AACTTATTAC AACAGATAGC AACAGTAAAG CCCGGGCAGG GTTGATTACC
ACTGACCACG GGAAAATTGA AACACCTATT TTCATGCCGG TAGGCACGGT AGGTAGTGTA
AAAGCAGTGA CGCAGGAGCA GTTGCGCGAC GATGTAAAAG CGCAGATCAT TCTGGGGAAT
ACGTATCACC TGTACCTTCG TCCGGGTATG GAGGTGTTGT CACAGGCCGG CGGACTACAC
AAGTTCAACG GCTGGGAAAG ACCTATGCTG ACAGATAGTG GTGGTTATCA GGTGTTTTCC
CTGGCAGCTA ACCGGAAAAT AAAGGAAGAA GGATGCCTTT TTCAGTCCCA TATCGATGGT
TCCCGCCATC TTTTTACACC GGAAAATGTA ATGGACATCC AGCGTACCAT TGGCGCCGAT
ATTATCATGG CGTTTGATGA ATGCCCGCCA TACCCTTCTG AGTACCGCTA CGCCAAAAAG
TCTATGGAAC TGACTCACCG CTGGCTGGAC CGTTGTATCA AACGCCTGGC GGAAACACAG
CCCGTTTATG GTCATGAACA GACCTTGTTC CCGATCGTAC AGGGTAGTAC CTATAAAGAC
CTCCGGACGA TTTCAGCTAC TGAGATTGCT GCCCGTGAAT GTGCCGGTAA TGCTATCGGC
GGTCTGAGTG TGGGTGAGCC GGAGCAGGAT ATGTATGAAA TGTGCGGACT GGTGTGCGAT
ATTCTGCCAA CGGAAAAGCC ACGTTACCTG ATGGGCGTGG GTACGCCCTG GAATATCCTG
GAAAACATCG CCCTGGGTGT GGATATGTTT GACTGTGTGA TGCCGACCCG TAACGGACGT
AATGGCATGT TATTCACCTG GAACGGGGTG ATCAATATAA AAAACAAGAA ATGGGCGACT
GATTTCACGC CAATCGATGA AAACAGTCCC TGCTTCGCCA GTAACCGCTA TACTAAAGCT
TATCTGAGGC ATTTATTTGT CGCAGGCGAG ATCCTGGGTA TGCAGCTGGC AAGTATCCAT
AATATTGCTT TTTACCTGGA ACTGGTACAA GAGGCCAGGA AACAGATCCT TGCAGGAAAC
TATGCCTCCT GGAAAAATAG TATGGTGCCG CAGTTGAAAC AAAGACTTTA G
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| Protein sequence | MIFELITTDS NSKARAGLIT TDHGKIETPI FMPVGTVGSV KAVTQEQLRD DVKAQIILGN
TYHLYLRPGM EVLSQAGGLH KFNGWERPML TDSGGYQVFS LAANRKIKEE GCLFQSHIDG
SRHLFTPENV MDIQRTIGAD IIMAFDECPP YPSEYRYAKK SMELTHRWLD RCIKRLAETQ
PVYGHEQTLF PIVQGSTYKD LRTISATEIA ARECAGNAIG GLSVGEPEQD MYEMCGLVCD
ILPTEKPRYL MGVGTPWNIL ENIALGVDMF DCVMPTRNGR NGMLFTWNGV INIKNKKWAT
DFTPIDENSP CFASNRYTKA YLRHLFVAGE ILGMQLASIH NIAFYLELVQ EARKQILAGN
YASWKNSMVP QLKQRL
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