| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6909 |
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| Symbol | |
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| ID | 8363101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8652153 |
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| End bp | 8654012 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644969042 |
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| Product | Mannosyl-glycoproteinendo-beta-N- acetylglucosami dase |
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| Protein accession | YP_003126511 |
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| Protein GI | 256425858 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1705] Muramidase (flagellum-specific) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.490682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.152044 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTAA GGAGAACCGT TTTAGTGTGC AGCTTTTTGT TGGGCTGCAT GTCATTGCTG
AAGGCACAAA CCCAGACGAC GCAGCAGTAT ATTGCGAAGT TCAAGGATAT TGCCATCGAT
GAAATGCAGC GCAGCGGCGT ACCTGCGTCT ATCAAGCTGG CACAGGGGAT CCTGGAAACA
CAGTCAGGTA ACGGCTGGCT GGTACAGAAC TCCAATAATC ACTTCGGTAT CAAATGTAAA
AACAACTGGA CGGGTGAAAG CGTAAGATAT GATGATGATG CCCGCCAGGA ATGTTTTCGT
AAATACGGCT CTGCAGCCGA TTCCTATAAA GACCATTCAG ACTTTCTGAG AAATAATCCT
CGTTATGCGT TCCTTTTCCA GTTCCAGGAA GAAGACTACA AATCATGGGC ATATGGTCTT
AAACAGGCCG GATATGCTAC CAGTACGACA TATCCCCAAC AGCTGATTAA ACTCATTGAA
GATTACAATC TGCAACAATA TACCCTGGAA GGGGAAGGCG TTACTAAAGC TGGTTCCAGC
GGCGCCAAGA CAGGAGAGGA AATGGTTGGT TACAAACCTG TTAAACCATC ATCGCCTGTC
GCCTCCACGA CTAAACCTTC TGCTGTTTCA GCGGCTAATT CGCCTAAAGG CATCTTTCAG
ATCAATGACC GTAAAGTGAT CGTCGTACCA GCTGGTACTT CATTGATACA GGTGGCCAAT
GACCGGGATA TCAAACTCAG AAACCTGGTG CATTACAATG ACCTGGAGAA TGATAATCCG
CTGAAGAAAG ACAGCTACCT CTTCCTGCAG AAAAAAGCTA AATCCGGTAA GAATGACTAC
CATACCGTTG CTCCCGGTGA GACGATGTAT GACATCGCCC AGACAGAAGG TATACAGCTT
CGCTGGTTAC GCCGCCGTAA CAAGATGAAG GAAGGACAGG AGCCTGAAGC AGGCGAAAGA
CTGGCATTAC AAGGATATGC CAATAAAGCG CCTAAGCTGG GTAAAAATCC GCCTCCTGAA
GATCCTACCA TAGGCGATCT GGATCCGGGA AAGATCATGG ATGATGTAAA GGCGGAGATT
GAAAGAGAGC GCCAGGAAGA AATGGCTATG CAGAAAGCAG ATGAAGAACG CCGCCAGCAA
CAGGCTGCTG CACAGGGTGG ATTACCGGCA GGAATGATGG ATGATCTCAA AAAGATCGGG
GATGTGAAAA CTAACGGTAC CGCTGCGCAG GGTACGCCGG CCGCTTCAAA GCCTGCAACT
ACGCAATCAT CCGCGCCAGC GCAGACGACA CCAACAGGTA CGCAACCAAC GCAGTCTGCC
AACACACAGC CATCTTCTCC AGCGCAGACC AAACCAGCGC AGACGACACC AACAGGTACA
CAACCAGCAC AGACAACTCC TGTGGCATCT CAACCTGTGT CCTCTTCCAG ACCAGAGAAT
ACAACTCCTT CCAATACGGA GCCTGCTCCG CCTGTACAGA CGCAGCCGGT AACAACACCA
GCCAGTACAA CACCTGCACA AACAGCACCT GCGCAGCCTG TCAATACTTC CCGTCCGGCC
AATACTCCGC CAGTGGAAGA ACCAGCCAGT CCTGCAGGAA CAACTCCTGC AGCCCCTGTA
CAACCGGTTA GCTCACAGCC TGCTCCTGCT ACAACGCCGG CGCAACCAGC TACGCCGCCG
TCGGAAACAA AAGGACCGAT CAGGGAAGGC AACTCGCTGT ACCATGAAGT GCAGACAAAA
GAAACACTTT ACGCCATTGC TAAACGTTAC GGTGTAACGG TTGAACAGCT ACAGCAGTGG
AATCACCTTG AATCATTTGA TATTAAAATA GGACAACGAC TTTTAGTCGG CAAAATCTAA
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| Protein sequence | MQLRRTVLVC SFLLGCMSLL KAQTQTTQQY IAKFKDIAID EMQRSGVPAS IKLAQGILET
QSGNGWLVQN SNNHFGIKCK NNWTGESVRY DDDARQECFR KYGSAADSYK DHSDFLRNNP
RYAFLFQFQE EDYKSWAYGL KQAGYATSTT YPQQLIKLIE DYNLQQYTLE GEGVTKAGSS
GAKTGEEMVG YKPVKPSSPV ASTTKPSAVS AANSPKGIFQ INDRKVIVVP AGTSLIQVAN
DRDIKLRNLV HYNDLENDNP LKKDSYLFLQ KKAKSGKNDY HTVAPGETMY DIAQTEGIQL
RWLRRRNKMK EGQEPEAGER LALQGYANKA PKLGKNPPPE DPTIGDLDPG KIMDDVKAEI
ERERQEEMAM QKADEERRQQ QAAAQGGLPA GMMDDLKKIG DVKTNGTAAQ GTPAASKPAT
TQSSAPAQTT PTGTQPTQSA NTQPSSPAQT KPAQTTPTGT QPAQTTPVAS QPVSSSRPEN
TTPSNTEPAP PVQTQPVTTP ASTTPAQTAP AQPVNTSRPA NTPPVEEPAS PAGTTPAAPV
QPVSSQPAPA TTPAQPATPP SETKGPIREG NSLYHEVQTK ETLYAIAKRY GVTVEQLQQW
NHLESFDIKI GQRLLVGKI
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