Gene Cpin_6898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6898 
Symbol 
ID8363090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8637354 
End bp8638022 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content46% 
IMG OID644969031 
ProductRhodanese domain protein 
Protein accessionYP_003126500 
Protein GI256425847 
COG category[R] General function prediction only 
COG ID[COG1054] Predicted sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTATA AGTATTATAT ATACTTACTG TTCGGAAGCA TACTGTTTTC CGTTTCAAAC 
AGGGTAAATG CGCAGGAGGT AAATGCAGTA GTTTTTAACG ACTCTATCCG GAATGGGAAT
GTGCAGGTTT TTGATGTACG TACTGCTGGT GAGTACAATA CAGGACACCT GTCCAATGCT
TTACAGGCGG ATTACACAAA GAAGGAGGAG TTTATGGAAA GAGTAAAGTA CCTGGACAAA
GACAAAACGG TTTATATCTA TTGCCTGAGT GGCGGACGTA GTGCGAAAGC TGCCAGCTGG
ATGCGCGGGA ACGGTTTTAA AAAGGTAATC GAACTTGAGG GTGGTATCAA TGCCTGGAAA
CAGGCAGGTG AGCCGGTAGA AGGTACGGCC GATGTGAAAC AGATGGAGGT GGATGCATTC
CGTGCGGATA TTGGTAAAGG AGAAGTGCTG GTAGATGTAG GGGCTGAGTG GTGTCCTCCA
TGCCGTAAGA TGGCTCCTGT GCTGGAAGCG TATCTGTCTG AGCATAAAAC AGTACGTCTG
CTGAAAGTGG ATGGTGGCCG TGACCAGGAT GTTATGCAGT CTATAAAGGT GACTTCCCTG
CCTACCTTCA TTTTGTATAA AGATGGCAGG GAAGTGTGGC GCAAACAGGG CGTTTACGAA
CAGTTATAG
 
Protein sequence
MIYKYYIYLL FGSILFSVSN RVNAQEVNAV VFNDSIRNGN VQVFDVRTAG EYNTGHLSNA 
LQADYTKKEE FMERVKYLDK DKTVYIYCLS GGRSAKAASW MRGNGFKKVI ELEGGINAWK
QAGEPVEGTA DVKQMEVDAF RADIGKGEVL VDVGAEWCPP CRKMAPVLEA YLSEHKTVRL
LKVDGGRDQD VMQSIKVTSL PTFILYKDGR EVWRKQGVYE QL