| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6857 |
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| Symbol | |
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| ID | 8363049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8589369 |
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| End bp | 8590961 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644968990 |
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| Product | ATP dependent DNA ligase |
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| Protein accession | YP_003126459 |
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| Protein GI | 256425806 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.924337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.118478 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAAT TTGCCACACT CATCAGAATA TTGAGCAACA GCACCAAGAC GAATGAGAAA
CTGGATGCCC TCAGTAAGTA CATGGCGACT GCCGATGCTG CCGACCGGCT GTGGGTACTG
GCGCTCTTTA CAGGTCGCCG GCCGAAACGT ACCGTGAATG CAACACAACT CAGTACCTGG
TGCTTACAGA TGACCGGTTT ACCCGCCTGG CTCTATGAAG AGTGTTATCA TACTGTCGGG
GATCTGGCAG AAACCATCGC ACTGCTGCTG CCTCCCGGTA AAAGCATTTC CGTGCATCCC
CTGCATTACT GGATCGATCA ACTGATACAG CTGGAAAAAG CCGATGAAAC GACCAAACAA
ACCTTCATCC TCAAAGCCTG GGAAGAACTG GATACCAGCG AACGCTTTGT ATTCAATAAA
CTGATTACAG GGGGCTTCCG TATCGGTGTA TCACAGAAGA TGATGGTCAA TGCCCTGGCA
GATACGTATG ATATTCCGGC GGCGACCATC TCACATATGA TCAGCGGTAA CTGGGATCCA
CAGAAAACCA CTATAGAGGC ATTATTAAGC GAAAATATTA CCGAAGCCGA TGCTTCCAAA
CCTTTTCCGT TTTACCTCGC CTATGCCCTT GAAACTGGCC CTGCTGAACT GGGTACGCCG
GAACAATGGC AGGCGGAATG GAAATGGGAT GGTATCCGCG GACAGATCAT CAAGCGTAAT
GGACAGCTGT TTGTATGGTC ACGCGGAGAA GAACTGATAA CGGAGAAGTT CCCTGAATAT
CAGCCACTCC TGGAACTATT ACCTGAAGGT ACAGTGCTGG ACGGAGAGAT CCTGACTTTC
GCAGATGGCT TTCCCTTACC TTTTCAAACC CTGCAGACAC GTATCGGCAG GAAGAACGTT
ACCAAGAAAC AATTACAGGA AGCGCCCGTC GCCTTCCTGA GTTATGACCT GCTGGAATGG
GAAGGACAGG ATATCCGGAC TACCGCCCTC CAGGAACGCC GGGTACTGCT GGAACAACTG
GTGGAAAAGA TCAATCATCC TACCCTTCGC CTCTCTCCTG CCATTACCTT TCATGACTGG
GAAGAACTGG CGGCATTCCG CTTACAGGCC AGAGAAAAAG GGAGCGAAGG ACTGATGCTG
AAGAAACTGG ATTCTGCCTA CCAGGTGGGT CGTAAGAGAG GCGACTGGTG GAAATGGAAA
ATAGATCCGC TGACAATAGA CGCTGTCATG ATATATGCCC AGAAAGGACA CGGCCGGCGG
TCGAACTTAT ACACAGATTA TACTTTTGCC GTCCGGGACG GGGAACAGCT GGTGTCGTTT
ACAAAGGCTT ATTCCGGCTT GACGGACAAA GAGATCAACG AAGTGGATAA CTGGGTAAAA
CGGAATTCTA TTGAGAAGTT TGGTCCGGTG AGGACCGTGA AACCGGAGCT GGTATTTGAA
ATCGGTTTTG AGGGCATCGC AGCTTCCAAC AGGCATAAAT CAGGCGTAGC CCTACGTTTT
CCCCGGATAT TACGCTGGCG GAAGGATAAA CCGGTAACAG AGATCAACAC ACTCACTGAT
TTACAGCAAC TACTGCAAAT GCACAAACAA TAA
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| Protein sequence | MKEFATLIRI LSNSTKTNEK LDALSKYMAT ADAADRLWVL ALFTGRRPKR TVNATQLSTW
CLQMTGLPAW LYEECYHTVG DLAETIALLL PPGKSISVHP LHYWIDQLIQ LEKADETTKQ
TFILKAWEEL DTSERFVFNK LITGGFRIGV SQKMMVNALA DTYDIPAATI SHMISGNWDP
QKTTIEALLS ENITEADASK PFPFYLAYAL ETGPAELGTP EQWQAEWKWD GIRGQIIKRN
GQLFVWSRGE ELITEKFPEY QPLLELLPEG TVLDGEILTF ADGFPLPFQT LQTRIGRKNV
TKKQLQEAPV AFLSYDLLEW EGQDIRTTAL QERRVLLEQL VEKINHPTLR LSPAITFHDW
EELAAFRLQA REKGSEGLML KKLDSAYQVG RKRGDWWKWK IDPLTIDAVM IYAQKGHGRR
SNLYTDYTFA VRDGEQLVSF TKAYSGLTDK EINEVDNWVK RNSIEKFGPV RTVKPELVFE
IGFEGIAASN RHKSGVALRF PRILRWRKDK PVTEINTLTD LQQLLQMHKQ
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