Gene Cpin_6848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6848 
Symbol 
ID8363040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8579082 
End bp8580107 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content47% 
IMG OID644968981 
Producthypothetical protein 
Protein accessionYP_003126450 
Protein GI256425797 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAGG TACTGGAAGT TATGAGTGAT ACGCAGTTTC ATCACGCGCA GACAGCTCAC 
TGTGAGAGTG GCGTCATTTC CAATATATTC CGTCACTACG GATTAGAGAT CAGTGAACCG
ATGGCCTTCG GTATAGGCGC CGGTATCTTC TTTGGTCACC TGCCCTTTGT AAAGGTGAAC
GGTGTACCAG GTACTACCTA TCGTGTGGTA CCAGGTGCTA TCTTCAAAAG AGTGAGCAAA
CGCCTGGGGG TGAAAATAGC ATCACAGACC TTCTCTAATC CTCAGAAAGG AATGGAAGCA
CTTGATCGCG TACTGGAACA GGGCAGACCC GTAGGGCTGT TATCCAGCGT ATACTACCTC
CCATATTTTC CACCTGCTTA TCGTTTCCAT TTTAACGCGC ATAACCTGGT CGCTTATGGA
AAGGATGAAG ATAACTATCT TATCAGCGAT CCTATCATGG AGCAGGTGAC AGAGATCGAT
CCAAAGAGTC TGGCCGAAGC CCGCTTCGCG AAAGGATTCC CGGCTCCTAA AGGAAAGATG
TATTACCCTG TAGAAGTACC TAAAGAAATT TCTTTTGAAC AGCCGATCCG TGATGGTATC
AAACAGGCTT GCAGTGATAT GCTGAATATT CCGCTGCCGA TGTTTGGGGT GAAAGGGATG
CGTTTCCTGG CGAAACGACT GAAGTATTAT CCGGAGAAAG TAGGGGATAG AAAAGCCGTT
TTATACCTGG GGAATATTAT CCGTATGCAG GAGGAAATAG GCACCGGTGG TGCAGGTTTC
CGGTTTATGT ATGCCGCCTT CTTACAGGAA GCAGCCGGTA TTCTCAGAAG AGAAGAACTA
TCTGAATTGT CAGCAGAGCT GACCCGTATC GGTGATACCT GGCGCACCTT TGCATTCAAT
GCAGGCAGGG TGTGCAAGAG CAGAAGCGCG AATAACGTAT CATATGGCGA ACTGAGTGAA
ATGCTGATGC AATGTGCTGC TGAAGAAGAA GTATTATTCC GGAAATTGTC GAAAGTGAAA
TTATAA
 
Protein sequence
MDEVLEVMSD TQFHHAQTAH CESGVISNIF RHYGLEISEP MAFGIGAGIF FGHLPFVKVN 
GVPGTTYRVV PGAIFKRVSK RLGVKIASQT FSNPQKGMEA LDRVLEQGRP VGLLSSVYYL
PYFPPAYRFH FNAHNLVAYG KDEDNYLISD PIMEQVTEID PKSLAEARFA KGFPAPKGKM
YYPVEVPKEI SFEQPIRDGI KQACSDMLNI PLPMFGVKGM RFLAKRLKYY PEKVGDRKAV
LYLGNIIRMQ EEIGTGGAGF RFMYAAFLQE AAGILRREEL SELSAELTRI GDTWRTFAFN
AGRVCKSRSA NNVSYGELSE MLMQCAAEEE VLFRKLSKVK L