| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6825 |
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| Symbol | |
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| ID | 8363017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8550252 |
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| End bp | 8551019 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644968958 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003126427 |
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| Protein GI | 256425774 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.966986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTTAC AATCTTTTGA TCTGACAGGT AAGACCGCCC TGGTAACAGG GTGTAAAAGA
GGCATTGGTA TGGGGATGGC GGTAGCGCTG GCAGAAGCAG GCGCGGATGT TATCGGTGTA
TCCGCCTCAC TGGAAAAAGA AGGAAGTGAA GTGGAGAAAG CGGTGAAGGC GACAGGCCGG
CAATTCTACG GTTACCAGTG TGATCTGGGA AGCCGGGAAG CGCTTTATGC CTTTGTGAAA
GAAGTACATA CCAATCATCC TGTAGTGGAT ATACTGGTGA ATAATGCCGG CACTATTCTC
CGGAAACCAG CGGCAGAACA TCCTGACGAA TACTGGGATG AAGTGATCAA TATCAATCTG
AATGCGCAGT TTATTCTTAC CCGTGAAATC GGTAAAGGAA TGATCGAACG AGGCAGCGGA
AAGATTATCT TTACAGCATC GCTACTCACC TTCCAGGGAG GTATCAATGT GCCCGGATAT
GCCGCCAGTA AAGGAGCTGT AGGTTCACTG GTGAAGGCAT TCGCCAATGA ATGGGCAGGT
AAGGGGATCA ATGTGAATGC AATAGCACCG GGATATATCG CTACCGACAA TACAGCTGCA
TTACGTGCAG ATGAAAAACG CAGTGCTTCT ATATTGGAGC GTATCCCTGC AGGCAGATGG
GGAGAACCAG CCGATTTTAA AGGACCGGTT GTATTCCTGG CATCTGCGGC GGCTGACTAT
GTACATGGCA CGATACTGAC TGTTGACGGA GGATGGATGG GGCGTTAA
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| Protein sequence | MILQSFDLTG KTALVTGCKR GIGMGMAVAL AEAGADVIGV SASLEKEGSE VEKAVKATGR
QFYGYQCDLG SREALYAFVK EVHTNHPVVD ILVNNAGTIL RKPAAEHPDE YWDEVININL
NAQFILTREI GKGMIERGSG KIIFTASLLT FQGGINVPGY AASKGAVGSL VKAFANEWAG
KGINVNAIAP GYIATDNTAA LRADEKRSAS ILERIPAGRW GEPADFKGPV VFLASAAADY
VHGTILTVDG GWMGR
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