Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6799 |
Symbol | |
ID | 8362991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 8516755 |
End bp | 8517975 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644968932 |
Product | Fibronectin type III domain protein |
Protein accession | YP_003126401 |
Protein GI | 256425748 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000311122 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000000000294335 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACGAT ATAAAATAGC TAACATATGT CTGCTGGGCG GTTTACTCAC CGTACTCGGG TGCAGCAAGA AACCTACGGA CTACCGTGAA TTCCTGAACG GGGAAGAATT AGTGTATCCA GGTAAAGTAA CCAATCCACA GGCCATGCCT GGTAATGGAA GAATACAGCT GGTATGGCAG CCAAGTCCTG ATCAGAGCAT TGTACAATAC AGGGTTTTCT GGAACAATGG CGCCGACTCA CTCACTATTC CGGCATCTAC ACACAACACA ACAGACACGG TAAAATGTAC GATCCCCGGC TTGTCGGAAT ATGTATATTC TTTTACGGTC TATTCGTATG ATGCAAAAGG CAATCGTTCT GTAGCAACAG AGATCAGCAA TGCAAGGGTG TATGGCTCGG TATATACGGC AACACTCAAC AACAGGCTGA CAGATGCAGA CAATCCTTTC ACGGTGAATG AAGACAATTC AGTAACACTG CGCTTCGTTA CACCTGATAC GATCAACATT AACACCACAC TGAAGTATAC GAATCAGAGC AACCAGGAAG TCAGTAAATC ACTGGCCCCT GCCGAAAGTA TGCTCACACT GACCGACTAT AAATTTGGTA CACCTGTTCT GTATCAATCT TCCTATATTC CTGTGACAAA CGCCCTGGAT ACATTCTACA CACTGCGTGC TGACACCTTC CCGACTATAT TCCGGCTGGT ACAATGCGAC AAGAGCCTGT TCCGGGAACG TGATATGTGG GGAGATATGG GTATCTACCA GTCAGATACC AGGGTCAGCA AACTGTGGGA CGGCTCTGTT GGTCCGCAGG GATATCCGAA TATCTTCCAT GCGGATGGCA ACGGATCGCT GCCAAGAACA CTCAGCTTTG ATATGGGAAA AGTCTATAAC AACCTGGGGG TGATCGAAGA AACAGGAAGA GATTGCTGTA ACAATCCGGA TCAATTCGAA GTATGGGGTA TTGCAGATAT CGACAATGCG ATTCCTGAAA TGAATCCGAA TGAATCAGGA TGGAAAGATG CCATGATGAA TAAAGGATGG ACACTGTTGA AGGAAGTCAT CAGAACAGAC AACGGCAACA ACGCCTACAA AACAAACCTG GTTGACAATC CTCCGCCGAT ACGTTATATC CGTATCAGGT TCCTCCATAA CGCGAACGGA GAGACAAGTT ATGTGAACCT GTCGGAAATT ACCTTCTGGA ACAAAGAATA A
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Protein sequence | MKRYKIANIC LLGGLLTVLG CSKKPTDYRE FLNGEELVYP GKVTNPQAMP GNGRIQLVWQ PSPDQSIVQY RVFWNNGADS LTIPASTHNT TDTVKCTIPG LSEYVYSFTV YSYDAKGNRS VATEISNARV YGSVYTATLN NRLTDADNPF TVNEDNSVTL RFVTPDTINI NTTLKYTNQS NQEVSKSLAP AESMLTLTDY KFGTPVLYQS SYIPVTNALD TFYTLRADTF PTIFRLVQCD KSLFRERDMW GDMGIYQSDT RVSKLWDGSV GPQGYPNIFH ADGNGSLPRT LSFDMGKVYN NLGVIEETGR DCCNNPDQFE VWGIADIDNA IPEMNPNESG WKDAMMNKGW TLLKEVIRTD NGNNAYKTNL VDNPPPIRYI RIRFLHNANG ETSYVNLSEI TFWNKE
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