Gene Cpin_6799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6799 
Symbol 
ID8362991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8516755 
End bp8517975 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content46% 
IMG OID644968932 
ProductFibronectin type III domain protein 
Protein accessionYP_003126401 
Protein GI256425748 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000311122 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000000294335 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACGAT ATAAAATAGC TAACATATGT CTGCTGGGCG GTTTACTCAC CGTACTCGGG 
TGCAGCAAGA AACCTACGGA CTACCGTGAA TTCCTGAACG GGGAAGAATT AGTGTATCCA
GGTAAAGTAA CCAATCCACA GGCCATGCCT GGTAATGGAA GAATACAGCT GGTATGGCAG
CCAAGTCCTG ATCAGAGCAT TGTACAATAC AGGGTTTTCT GGAACAATGG CGCCGACTCA
CTCACTATTC CGGCATCTAC ACACAACACA ACAGACACGG TAAAATGTAC GATCCCCGGC
TTGTCGGAAT ATGTATATTC TTTTACGGTC TATTCGTATG ATGCAAAAGG CAATCGTTCT
GTAGCAACAG AGATCAGCAA TGCAAGGGTG TATGGCTCGG TATATACGGC AACACTCAAC
AACAGGCTGA CAGATGCAGA CAATCCTTTC ACGGTGAATG AAGACAATTC AGTAACACTG
CGCTTCGTTA CACCTGATAC GATCAACATT AACACCACAC TGAAGTATAC GAATCAGAGC
AACCAGGAAG TCAGTAAATC ACTGGCCCCT GCCGAAAGTA TGCTCACACT GACCGACTAT
AAATTTGGTA CACCTGTTCT GTATCAATCT TCCTATATTC CTGTGACAAA CGCCCTGGAT
ACATTCTACA CACTGCGTGC TGACACCTTC CCGACTATAT TCCGGCTGGT ACAATGCGAC
AAGAGCCTGT TCCGGGAACG TGATATGTGG GGAGATATGG GTATCTACCA GTCAGATACC
AGGGTCAGCA AACTGTGGGA CGGCTCTGTT GGTCCGCAGG GATATCCGAA TATCTTCCAT
GCGGATGGCA ACGGATCGCT GCCAAGAACA CTCAGCTTTG ATATGGGAAA AGTCTATAAC
AACCTGGGGG TGATCGAAGA AACAGGAAGA GATTGCTGTA ACAATCCGGA TCAATTCGAA
GTATGGGGTA TTGCAGATAT CGACAATGCG ATTCCTGAAA TGAATCCGAA TGAATCAGGA
TGGAAAGATG CCATGATGAA TAAAGGATGG ACACTGTTGA AGGAAGTCAT CAGAACAGAC
AACGGCAACA ACGCCTACAA AACAAACCTG GTTGACAATC CTCCGCCGAT ACGTTATATC
CGTATCAGGT TCCTCCATAA CGCGAACGGA GAGACAAGTT ATGTGAACCT GTCGGAAATT
ACCTTCTGGA ACAAAGAATA A
 
Protein sequence
MKRYKIANIC LLGGLLTVLG CSKKPTDYRE FLNGEELVYP GKVTNPQAMP GNGRIQLVWQ 
PSPDQSIVQY RVFWNNGADS LTIPASTHNT TDTVKCTIPG LSEYVYSFTV YSYDAKGNRS
VATEISNARV YGSVYTATLN NRLTDADNPF TVNEDNSVTL RFVTPDTINI NTTLKYTNQS
NQEVSKSLAP AESMLTLTDY KFGTPVLYQS SYIPVTNALD TFYTLRADTF PTIFRLVQCD
KSLFRERDMW GDMGIYQSDT RVSKLWDGSV GPQGYPNIFH ADGNGSLPRT LSFDMGKVYN
NLGVIEETGR DCCNNPDQFE VWGIADIDNA IPEMNPNESG WKDAMMNKGW TLLKEVIRTD
NGNNAYKTNL VDNPPPIRYI RIRFLHNANG ETSYVNLSEI TFWNKE