Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6798 |
Symbol | |
ID | 8362990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 8515489 |
End bp | 8516736 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644968931 |
Product | hypothetical protein |
Protein accession | YP_003126400 |
Protein GI | 256425747 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000307984 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000000000281527 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTCATA TACAACAGCT GCTGCTGTTA TTCTTTATAT CAGGCTTACT GCCTTTCTCC TGTAAGGAGA TTGACGGTTA CAACGAAATC GTATCTACTG ACATGACCAA ACCGGATCCT GTCAAAGATG TAAAAGTGGT GAACTTTAAC GGAGGCGCCT ATATCACCTA TACGCTGCCT AAATCATCCA ATATCCTGTA TGTACAGGCC ACATACAAGA TCAATGATAA GGTGAGCAGG GAAACCAAAT CCTCTTATTA TTCTGACAGT GTCACCGTCA GCGGTTTTGC AAAGAGTCAG GACTATGATG TGGAATTACG CGTAGTAAGC CGGGCACAGG TATCTTCTGA ACCGGTGAAT GTAAAAGTAC ATCCGGATAC GCCACCTTAT CTGCTGTCAC GTCCTACGGT AACCATGCGC CAGGATTTCG GCGGCGTACA GATAGACGCG ATCAACATGG CAAAAGCCAA TCTGGGCATC ATTGTTATTG CACCTGATCA GACCAACAAG TATCAGATTA TCGCGCAGAA CTATACGGAT AAAGATACCA TCTCGTTCAG TCTGCACGGT TATGATACCA TTCCACAGAA GTTCGGCGTA TATGTAACGG ACCAGTGGGG TAACATCTCC GACACATTGC TGTCTACTAT TACGCCTGTT TACGAGGCAC AAATGGATAA ATCACAGTTC CGTAGCTATC AGCTGGGAAC AGATGCCAGA ACCGGCTTCG GATGGTCAAT AGAAAACCTC TGGAATAACA ATACAGGCTC TCCGGGTTAT CATACCGAAC AACCGATACA ACCGCTGGTA TGGCCGGCAG TGATCACATT TGACATGGGT AGAGCTGCAA GGCTGAGCCG GTATACGATC TGGAACAGGG GTATTGATGG AAGTGGAACC TGGTTATGGC AGGCCGGTGC GCCAAGAACA TGGGTATTGT GGGGACGTGA GGATAGTCCG GTAGATGAAA CAATGCCGGA TGAAAATCAC CTTCCGCCGG TAGGTGGTAT GACGCCAAAA GGATGGATCA ACATGGGTTT CTTTACAGCA CCTGACAAAC CATCCGGCTT ACCGAATCCA CAGTACAACA ATACCGATCT CCTGTTCTGG AACGCAGGTT TTAGTTACAA CTTTTCCCTG AATCTGCCGA AAGTGAGGTA CATGCGTTTT GAATGTGTTT CCAATATGGC GCAGACCAAC AACTTCTTTA ACGTTACCGA ACTGTCATTC TGGGGCGATC CGAGATAA
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Protein sequence | MRHIQQLLLL FFISGLLPFS CKEIDGYNEI VSTDMTKPDP VKDVKVVNFN GGAYITYTLP KSSNILYVQA TYKINDKVSR ETKSSYYSDS VTVSGFAKSQ DYDVELRVVS RAQVSSEPVN VKVHPDTPPY LLSRPTVTMR QDFGGVQIDA INMAKANLGI IVIAPDQTNK YQIIAQNYTD KDTISFSLHG YDTIPQKFGV YVTDQWGNIS DTLLSTITPV YEAQMDKSQF RSYQLGTDAR TGFGWSIENL WNNNTGSPGY HTEQPIQPLV WPAVITFDMG RAARLSRYTI WNRGIDGSGT WLWQAGAPRT WVLWGREDSP VDETMPDENH LPPVGGMTPK GWINMGFFTA PDKPSGLPNP QYNNTDLLFW NAGFSYNFSL NLPKVRYMRF ECVSNMAQTN NFFNVTELSF WGDPR
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