| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6795 |
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| Symbol | |
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| ID | 8362987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8509158 |
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| End bp | 8510078 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644968928 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003126397 |
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| Protein GI | 256425744 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.312804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00000309577 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGGACTT TGAAGAGAAG GGATGGCTTC GAAGGAGAAC AGTTAATAAG TCTCCCCGAG
TCAGTCTGGA AAAACGCAAT CAAAATCAAT CCTGTATTGG GTCAGCTGTA TATTACCCAT
ATCGGTTATT TTCCCAGAGC CGCCTTTCAT TATAGAGACA GAGAGAAGGG CTGTATCGAT
AATATACTGA TCTACTGTAC GCATGGTAAG GGCTGGTATT CAATAGACGA CAGGACATTC
AAGGTCGGCA TGAACGAATA TGTCATCATC CCTGCAACGG AGCTTCCTTT ACGCTATGGA
TCTGATGATG AAAACCCGTG GAGTATTTAC TGGGTGCACT TTACAGGCAA AGACATGGCC
GCATTTAACC AGGGATTCAA CATCGGTTTA TATGACGGAC CAAGGCATAT TCACAGAAAT
GAAAAAGGTA TTCAGTTATG GAATACGATG TTTCAATGCC TGAAAATGGG ATTTGGAAAG
GATAACCTGG GCAAGGCAAA CCTGCATCTG TATCACTTTC TGGCCACTTT CCTGTTCCCG
GATAAAACGC CGAGGGAGCA GGAGCAGAGC CGTGACAGGA TCAATGAAAC GATCCTCTAT
ATGCAGCAGC ATCTCACTGT TGCACTGACA GTAGAAGAGC TGGCACAGCT GGTGGAGCTC
TCTCCATCCC ATTTTTCCAC GCTGTTTAAA AAGACGACAG GCATGTCGCC ACTGAACTAT
TTCATTCACC TGAAACTGCA GCAGGCCTGC CTCTTGCTGT ATACAACAGA TATGAAAATC
AAGCAGGTCG GTGTTGCAAT CGGCTATGAT GATCCTTACC ATTTTTCAAG GCTGTTCAAG
AAGAGTATGC ATGTCAGTCC GGAGCACTAC CGGGGTATGC GCAGGAAGGA TCATGGAGGT
ATGGATTGCC TCGTGTTGTG A
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| Protein sequence | MGTLKRRDGF EGEQLISLPE SVWKNAIKIN PVLGQLYITH IGYFPRAAFH YRDREKGCID
NILIYCTHGK GWYSIDDRTF KVGMNEYVII PATELPLRYG SDDENPWSIY WVHFTGKDMA
AFNQGFNIGL YDGPRHIHRN EKGIQLWNTM FQCLKMGFGK DNLGKANLHL YHFLATFLFP
DKTPREQEQS RDRINETILY MQQHLTVALT VEELAQLVEL SPSHFSTLFK KTTGMSPLNY
FIHLKLQQAC LLLYTTDMKI KQVGVAIGYD DPYHFSRLFK KSMHVSPEHY RGMRRKDHGG
MDCLVL
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