| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6619 |
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| Symbol | |
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| ID | 8362807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8301313 |
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| End bp | 8303205 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644968751 |
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| Product | RNA binding S1 domain protein |
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| Protein accession | YP_003126224 |
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| Protein GI | 256425571 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000014562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0151044 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCAGAAA ACAACATTTC TAACGAACAA AACGCTGAAC AACAGGCACC TGCAGCAGCA
GCTCAGGCAA CAGCGACAAC AAATGCGCCA GTTGTGGCTA CAGCTCACGA TGATTTCGAC
TGGAGCGTAG ACAAACGTAA CGTATCATCT TATAGTCAGG ATGAGAAAGC GAAGTACGAT
GCAACGTACG ACAACACTTT CAAAGTGATT GAAGAAAACG GTCTGCTCAC TGGTACTGTA
GTTGGTTTAA CCAAAACAGA CGTAGTGATC AACATCGGTT TCAAATCTGA CGGTCTGATT
TCACTGAACG AATTCCGTGA CCTGCAGGGT CTGAAAGTAG GAGACGAGGT TGAAGTACTG
GTAGTTGAAA AAGAAGACCG CGATGGTAAC CTGCACCTGA GCCGTAAACA GGCTCGTCAA
CAGCGTGCTT GGGAAAAAAT CGTGGAAGTT TACAAAACCG GCGAAGTGGT TACTGGTACT
GTTACCAGCA AAACCAAAGG CGGCTTGATC GTAGACGTTT ATGGTATGGA AACATTCCTG
CCAGGTTCTC AGATCGATGT TAAGCCTGTT ACAGACTACG ACCAGTTTGT AAGCAAAACA
ATGGAATTCA AAGTGGTTAA GGTTAACGAA GCCATCAGAA ATGCCGTTGT ATCTCACAAA
GCGCTTATCG AAAGCGATAT CGAACAGCAG AGAGTGGATA TTATCTCCAA ACTGGAAAAA
GGCCAGGTTC TGGAAGGTAC TATCAAAAAT ATCACCGATT TCGGCGCATT CATCGACCTG
GGTGGTCTGG ATGGTCTGCT GTACATCACC GACATCAGCT GGGGACGTAT CTCCCATCCA
AGCGAAGTAC TCCAGATGGA TCAGAAGATC AATGTGGTTG TACTGGACTT CGACGACGAG
AAAAAACGTA TCAGCCTTGG TTACAAACAA CTCACTCCGC ACCCATGGGA TACCCTGCCT
GCACACATCA CTGAAGGTGC GCGCGTAAAA GGTAAGGTAG TGAACATCGA AGATTACGGT
GCATTCCTGG AAATTCTGCC TGGTGTAGAA GGTCTGGTAC ACGTATCTGA GATCTCTTGG
GCTTCTACTC CTATCAACGC TAAAGAATTC TTCAAATTAG GTGAAGAATA CGAAGCAGTG
GTAGTAACAC TGAGCAAAGA AGAGCGTAAG ATGAGCCTGT CTATCAAGCA ACTGACAGAA
GATCCTTGGG CTACTATCGA AACTAAATTC CCGCTGGACA GCCGTCACAA AGGTATCGTG
AAGAACATCA CTCCTTATGG CGTATTCGTT GAGCTGGAAA CTGGTATCGG TGGTATGATC
CACATCTCTG ACCTGAGCTG GATCAAACGC TTCAACCACC CAAGTGAGTA CACTAAAGTG
GGTAGCGAGA TCGAGGTAGT TATTCTGGGT ATCGATAAAG ATAACCGTAA ACTGAGCCTG
GGTCACAAAC AGATCGAAGA AGATCCTTGG AACACTTTCG AAACTATCTT CCCGATTGGA
TCCGTTCATG AAGGTACTGT AGTGAAGAAA GACGAAAAAG GTGCTACAGT TCAGCTGCAG
TACGGTCTGG AAGCATACGC TCCTGCACGT CACCTGCGCA CTGAAGATGA GAAACCAATC
AACGTTGAAG ATGTGAAAGA ATTCATGATC ATTGAATTCG ATCGTAGCGA AAAACGTATC
CTGGTATCTC ATACAAGAGT GTGGGAACAA GCGAAAAATG AGGAGAAAGA AGCAGTTGCC
AAAGAAAGAA AGCAAGAAGC TGACAAAACT CGTAAAGCTG TGAAAACTAT CCAGAACAAG
GTAGAAAAAG CTACCCTGGG TGATCTGGGA GCTCTGGCTG AACTGAGAGA GAAGCTGAAG
CAGAACGAAG GCGACGAGAA AAAAGGTGAA TAA
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| Protein sequence | MAENNISNEQ NAEQQAPAAA AQATATTNAP VVATAHDDFD WSVDKRNVSS YSQDEKAKYD
ATYDNTFKVI EENGLLTGTV VGLTKTDVVI NIGFKSDGLI SLNEFRDLQG LKVGDEVEVL
VVEKEDRDGN LHLSRKQARQ QRAWEKIVEV YKTGEVVTGT VTSKTKGGLI VDVYGMETFL
PGSQIDVKPV TDYDQFVSKT MEFKVVKVNE AIRNAVVSHK ALIESDIEQQ RVDIISKLEK
GQVLEGTIKN ITDFGAFIDL GGLDGLLYIT DISWGRISHP SEVLQMDQKI NVVVLDFDDE
KKRISLGYKQ LTPHPWDTLP AHITEGARVK GKVVNIEDYG AFLEILPGVE GLVHVSEISW
ASTPINAKEF FKLGEEYEAV VVTLSKEERK MSLSIKQLTE DPWATIETKF PLDSRHKGIV
KNITPYGVFV ELETGIGGMI HISDLSWIKR FNHPSEYTKV GSEIEVVILG IDKDNRKLSL
GHKQIEEDPW NTFETIFPIG SVHEGTVVKK DEKGATVQLQ YGLEAYAPAR HLRTEDEKPI
NVEDVKEFMI IEFDRSEKRI LVSHTRVWEQ AKNEEKEAVA KERKQEADKT RKAVKTIQNK
VEKATLGDLG ALAELREKLK QNEGDEKKGE
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