Gene Cpin_6593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6593 
Symbol 
ID8362781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8268345 
End bp8269361 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content49% 
IMG OID644968725 
Productaldo/keto reductase 
Protein accessionYP_003126198 
Protein GI256425545 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.570213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACA AGGTATTAGG CAACTCCGGA TTAATGGTCT CCACACTCTG TCTGGGTACC 
ATGACCTTTG GAGGAAAAGG AAAGGGTGTT TATGAAATGG TCGGTACACT GGAACAACCA
GCTGTCGACG AACAGATCAA ACGGGCTGTA GAAGCGGGTA TCAATTTTAT AGATACTGCC
AATATATATG CCGAAGGGAG GTCCGAAGAA CTGACCGGCC AGGCTATCCG GAACCTGGGG
TTGAAACGGG ACGACCTGGT ACTGGCTACA AAGGTTTGCG CTCCAACCGG TAAAGGTGTA
AATGACCAGG GATTATCCCG TAAACACATC ATGCAACAGG TAGAAGCCAG TCTGAAACGT
CTCCGGACTG ACTACATCGA TCTGTACCAG GCGCACAACT GGGATCCGCT GGTGCCGTTG
GAAGAGACAT TGAGGGCCAT GGAAGACCTG ATCACTAGTG GTAAGGTAAG ATACATTGGT
GGCAGTAATC ACATGGCCTG GTACATGATG AAGGCGCTGG CTGTTTCCGA TAAGCATGGC
CTGCATAGCT ATATATCTAT GCAGTCACAT TATTCCATTG CAACAAGAGA ACTGGAAAGA
GATGTGGTGC CTGCGTTATT AGATCAGAAC GTAGGGCTGA TGGTATGGAG TCCGCTGTGT
GCCGGACTGC TGAGTGGTAA ATACCAGCGG AATGGTGAGA CGGAAGAAGC AGGCCGTTAT
CAGCATCACT CCTTTATCCC GGTAGATACA GCGCGGGCTT TCAATATACT GGATGTATTA
CATGTGATGG CGGCAGATAA AGGAACAACA GTTGCTCAAT TGTCGCTGGC CTGGTTGTTA
CATCAGCCAG CGGTAAGTAG TGTGATCATC GGCGCCAATA AGATGTCTCA GCTGGAGGAC
AATCTGGGAG CGGTAGACGT AACCCTGACA CCAGAGGAAT TAAAGCAGTT GGATGAAGTC
AGCAAGCTGG GAGTGGAATA TCCGGGTTGG ATTGCCAATC GGAGGGACCG CAGGTAA
 
Protein sequence
MKYKVLGNSG LMVSTLCLGT MTFGGKGKGV YEMVGTLEQP AVDEQIKRAV EAGINFIDTA 
NIYAEGRSEE LTGQAIRNLG LKRDDLVLAT KVCAPTGKGV NDQGLSRKHI MQQVEASLKR
LRTDYIDLYQ AHNWDPLVPL EETLRAMEDL ITSGKVRYIG GSNHMAWYMM KALAVSDKHG
LHSYISMQSH YSIATRELER DVVPALLDQN VGLMVWSPLC AGLLSGKYQR NGETEEAGRY
QHHSFIPVDT ARAFNILDVL HVMAADKGTT VAQLSLAWLL HQPAVSSVII GANKMSQLED
NLGAVDVTLT PEELKQLDEV SKLGVEYPGW IANRRDRR