Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6590 |
Symbol | |
ID | 8362778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8264731 |
End bp | 8265438 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644968722 |
Product | lipolytic protein G-D-S-L family |
Protein accession | YP_003126195 |
Protein GI | 256425542 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2755] Lysophospholipase L1 and related esterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.624172 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCTACT ATCTATGTTC AATGCTCTTT TTCTTATTTT TGGGAGCAAA AAAAGAGCAA ATCCCTATGA CATCGGGTCA TCATCCTTCC CAGGATACTT CTATCAACCA ATTTACTTAT CTCGCCCTGG GCGACAGCTA CACTATTGGC GAAAGCGTAC CGGAAAATGA GCGTTTTCCT AATCAGACAG CCAGACTGCT GGCAGCAGAT GGAATTGCCC TCGCTCCTCC GCGTATTATC GCCAAAACCG GCTGGACTAC TGATGAGCTG GAAGCCGCTA TCGCAGAAGC CAACGTTACA GACACTTTCA ATATCGTTAC CCTCCTGATC GGGGTCAATA ACCAGTACCG CGGCCGTAGC GTCTCTGAAT ATAAGACCGA GTTTACCCGC CTGCTTAAAC AGGCCATCCA CTTCGCTGCT GACCATTCAG ACAGGGTAGT CGTACTCTCT ATCCCTGACT GGGGCGCCGT GCCTTTTGCA GAAGGCCGTG ACAGACAACA GATTGCAGCA GATATAGACG CTTTTAATGC GGTTAACAAA AGCGTGTCGA GAAAGTTTAA GGTGCATTAC CTGGACATCA CTGCCGATAC CCGTAAAGCG CCACAGGATC CCGGACTGGT TGCCAGCGAC GGATTACACT ATTCACCTGA AGGAATGGCT GTATGGGCCG GTAAATTAGC CGGTATAATG CGCACCATCC TGCAATGA
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Protein sequence | MGYYLCSMLF FLFLGAKKEQ IPMTSGHHPS QDTSINQFTY LALGDSYTIG ESVPENERFP NQTARLLAAD GIALAPPRII AKTGWTTDEL EAAIAEANVT DTFNIVTLLI GVNNQYRGRS VSEYKTEFTR LLKQAIHFAA DHSDRVVVLS IPDWGAVPFA EGRDRQQIAA DIDAFNAVNK SVSRKFKVHY LDITADTRKA PQDPGLVASD GLHYSPEGMA VWAGKLAGIM RTILQ
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