Gene Cpin_6590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6590 
Symbol 
ID8362778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8264731 
End bp8265438 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content50% 
IMG OID644968722 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_003126195 
Protein GI256425542 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.624172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTACT ATCTATGTTC AATGCTCTTT TTCTTATTTT TGGGAGCAAA AAAAGAGCAA 
ATCCCTATGA CATCGGGTCA TCATCCTTCC CAGGATACTT CTATCAACCA ATTTACTTAT
CTCGCCCTGG GCGACAGCTA CACTATTGGC GAAAGCGTAC CGGAAAATGA GCGTTTTCCT
AATCAGACAG CCAGACTGCT GGCAGCAGAT GGAATTGCCC TCGCTCCTCC GCGTATTATC
GCCAAAACCG GCTGGACTAC TGATGAGCTG GAAGCCGCTA TCGCAGAAGC CAACGTTACA
GACACTTTCA ATATCGTTAC CCTCCTGATC GGGGTCAATA ACCAGTACCG CGGCCGTAGC
GTCTCTGAAT ATAAGACCGA GTTTACCCGC CTGCTTAAAC AGGCCATCCA CTTCGCTGCT
GACCATTCAG ACAGGGTAGT CGTACTCTCT ATCCCTGACT GGGGCGCCGT GCCTTTTGCA
GAAGGCCGTG ACAGACAACA GATTGCAGCA GATATAGACG CTTTTAATGC GGTTAACAAA
AGCGTGTCGA GAAAGTTTAA GGTGCATTAC CTGGACATCA CTGCCGATAC CCGTAAAGCG
CCACAGGATC CCGGACTGGT TGCCAGCGAC GGATTACACT ATTCACCTGA AGGAATGGCT
GTATGGGCCG GTAAATTAGC CGGTATAATG CGCACCATCC TGCAATGA
 
Protein sequence
MGYYLCSMLF FLFLGAKKEQ IPMTSGHHPS QDTSINQFTY LALGDSYTIG ESVPENERFP 
NQTARLLAAD GIALAPPRII AKTGWTTDEL EAAIAEANVT DTFNIVTLLI GVNNQYRGRS
VSEYKTEFTR LLKQAIHFAA DHSDRVVVLS IPDWGAVPFA EGRDRQQIAA DIDAFNAVNK
SVSRKFKVHY LDITADTRKA PQDPGLVASD GLHYSPEGMA VWAGKLAGIM RTILQ