| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6578 |
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| Symbol | |
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| ID | 8362763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8251067 |
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| End bp | 8252344 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644968707 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_003126183 |
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| Protein GI | 256425530 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.745679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAACAG GTAAAAAAGT AGCATTTCAT ACCCTCGGCT GTAAGCTGAA CTTTTCAGAA
ACCTCCTCTC TGAGCAGGCT GCTGGAACAG GATGGTTTTG TGAAAACAGA TTTCGAGGAG
CAGGCGGATG TGTATGTGAT CAATACCTGC TCTGTTACCG AAAACGCTGA TAAGGAGTGC
CGTCACCTGG TACGCCGTAT CCAGCGGAGA GCGCCGGAGA GCATGATAGT GATCACCGGC
TGTTATGCAC AGCTGAAACC AAAAGAGATC GCTGAGATCG AAGGCGTTGA TCTCGTACTG
GGGGCCGCAG AGAAGTTCAA TATCGTGGAC CATCTGAAAA CCCTCACCAA AGGCGACAGT
GCGAAGATCT GCTCCTGCGA CATCGAAGAC GTCAATACTT TCCATGCCTC CTATTCGGTA
AACGACCGTA CCCGCACCTT CCTGAAGGTA CAGGACGGCT GTGACTATAC CTGCTCCTTC
TGCACCATCC CGATGGCCAG AGGTAAAAGC CGTAGTGACA GTGTTGCCCG CGTAGTAGAA
CATGCGCATT CCCTGGCGGC TTCCGGTGTA AAAGAGATCG TTCTGACAGG TATCAACCTC
GGCGATTTCG GGAAAGGCCT GGAAGGCGGT AAGAAAAGAG AAGAAACTTT CTTTGAACTG
ATACAGGAAC TGGACAAAGT GGAAGGCATC GAGCGTTACC GCATCTCCTC CATCGAACCC
AACCTGCTGA GTAATGAGAT TATCGAATTT GTGGCCAACA GCAAACGCTT CATGCCGCAT
TTCCATATTC CTTTACAGAG CGGCAGTAAT GATATACTGG GACTGATGCG CCGTCGTTAC
CGTCGTGAAC TGTATGCTGA TAAAGTAGCG CTGATCAAAC AGTTTATGCC ACATTGCGCC
ATCGGCGTGG ATGTTATCGT TGGCTTCCCG TCCGAATCAG ACGCGCATTT CCAGGAAACA
TACGACTTCC TGCACGGACT GGATATTTCC TACCTGCACG TATTCACTTA TTCAGAAAGA
GCCAATACCA GTGCACTGGA CATCACCCCG GTGGTGCCTG TCAACATCCG TAACGAGCGC
AATAAAATGT TACGTAACCT GAGCCATAAG AAACAACAGT ACTTCAACGA ACAGCATGTA
GGTGAAACCA GGAAGGTATT GTTTGAAAAA CATGGTAAGG ACGGTATGAT GGAAGGCTAC
ACCGACAACT ATATTAAAGT CACTACGCCT TATCGCCTGG AATGGACCAA TCAGCTGATT
GAATGGGAAC TGAAGTAA
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| Protein sequence | MTTGKKVAFH TLGCKLNFSE TSSLSRLLEQ DGFVKTDFEE QADVYVINTC SVTENADKEC
RHLVRRIQRR APESMIVITG CYAQLKPKEI AEIEGVDLVL GAAEKFNIVD HLKTLTKGDS
AKICSCDIED VNTFHASYSV NDRTRTFLKV QDGCDYTCSF CTIPMARGKS RSDSVARVVE
HAHSLAASGV KEIVLTGINL GDFGKGLEGG KKREETFFEL IQELDKVEGI ERYRISSIEP
NLLSNEIIEF VANSKRFMPH FHIPLQSGSN DILGLMRRRY RRELYADKVA LIKQFMPHCA
IGVDVIVGFP SESDAHFQET YDFLHGLDIS YLHVFTYSER ANTSALDITP VVPVNIRNER
NKMLRNLSHK KQQYFNEQHV GETRKVLFEK HGKDGMMEGY TDNYIKVTTP YRLEWTNQLI
EWELK
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