Gene Cpin_6573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6573 
Symbol 
ID8362758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8245010 
End bp8246083 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content46% 
IMG OID644968702 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_003126178 
Protein GI256425525 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGAAA TACGTCAAAA ATACGAAGAA ATGAACCCTT TCCGGCGCAC CGGCAGACAC 
CCGGATACTA GTTATTCCGG GCATTCATTC GTAATTTTAA CCATTATGCA GATTTACGAT
CTATTAATAG TAGGGGCTGG TCCGATTGGC ATCGCTTGCG GACTGGCGGC ACAAAAGGCA
GGATTGAGTT ATGTTATTGC GGAAAAAGGA TGTCTGACCA ATTCCCTGTA TAATTATCCT
CTGTACATGA CCTTCTTTTC CACCTCGGAA AAGCTGGAAA TCGGCGGTAT TCCCTTCGTC
TCCATCAGCG CAAAACCTAT CCGTCCGGAA GCATTGGAAT ACTACAGACG CGTCACCATC
TCCAATCAGC TGAATGTGCG TTTATTTGAG CCTGTAGACG GTATAACACG CGAAGGGGAA
CTTTATCATA TCAACACCGA TAAGGCCTCC TATGTGGCTA AAAACGTCAT TATAGCCACC
GGCTTTTATG ATATTCCCAA TATGCTGCAC GTACCGGGTG AACACCTCGC AAAAGTGAAT
CACTATTACA AAGACCCACA CTTCTACGCC GCCCAGAAAG TAGTGGTGAT CGGTGCAAAT
AATTCCTCTG TGGACGCCGC CCTGGAAACC TGGCGGAAGG GTGCAGACGT AACAATGGTG
ATAAGAGAAG ACGGAATCGG CAAACGCGTG AAATACTGGG TAAAACCGGA TATTGAAAAC
CGTATCACAG AAGGTAGTAT CAAAGCATAT TATCACTCCA ATATCAAAGC GATCAGGGAA
AATGAAGTAG ATATCCAGAC GCCGGATGGT CTGATCACAA TAGAAAATGA TTTCGTGCTG
GCCCTGACCG GGTACCAGCC TAACTTTAAT TTCCTGGAGA AAGTAGGGAT CACCTTATCC
CGCGATGCAA AAAAGCATCC TACTTATAAC CCCGATACCA TGGAAACGAA TCTGCCCGGT
GTTTATCTGG CAGGCGTGGT ATGCGGCGGT ATGGATACGC ATGTCTGGTT CATCGAAAAC
TCCAGGGACC ATGCAGATAA GATTATTGGA CATATAACGG GTAAGCTCCC TTAG
 
Protein sequence
MVEIRQKYEE MNPFRRTGRH PDTSYSGHSF VILTIMQIYD LLIVGAGPIG IACGLAAQKA 
GLSYVIAEKG CLTNSLYNYP LYMTFFSTSE KLEIGGIPFV SISAKPIRPE ALEYYRRVTI
SNQLNVRLFE PVDGITREGE LYHINTDKAS YVAKNVIIAT GFYDIPNMLH VPGEHLAKVN
HYYKDPHFYA AQKVVVIGAN NSSVDAALET WRKGADVTMV IREDGIGKRV KYWVKPDIEN
RITEGSIKAY YHSNIKAIRE NEVDIQTPDG LITIENDFVL ALTGYQPNFN FLEKVGITLS
RDAKKHPTYN PDTMETNLPG VYLAGVVCGG MDTHVWFIEN SRDHADKIIG HITGKLP