| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6521 |
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| Symbol | |
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| ID | 8362705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8182794 |
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| End bp | 8184035 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968649 |
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| Product | TonB family protein |
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| Protein accession | YP_003126126 |
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| Protein GI | 256425473 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.829855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.244151 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAT TCCTTCCTTA CGTTATAAAA ATGCTCCTCT GTTCGGGCAT CCTGTACGGC
TACTATGCCC TCGTACTGAA AAACAATTCA TTCCACCGCT GGAACAGAGC CTTTATTCTG
CTGGCTGTCA TCGCTTCTCT GCTGATACCC ACCCTGCAGT TTTCTATGAA TACCACCCCT
ATAACATCGC AGCAGTTAAA TATGATCGTT GTCTGTGGGT ATGTAGCCGA TAATATGCAG
AAAGCCGGAC TGGATCTCAC ATCCTGGATA CCAGCAGGCA TTTACCTGTT CATTACATTA
CTATTACTGG CCAATATCGC CAGTAACTGG ATCCTCGTCA AAAGACTGAT ACGTAAAGGA
GAAAAAACAA CCTTTAATGG TTACCAGCTG ATTCATCATC CACAGGTAAA ATCTACCTTC
TCCTTCTTTG GCAGCATATT CTGGGCAGAA GAGGCTACAA AGGATAGTCC GGAAGGCCGT
CAGATACTAA AGCACGAACT GGAACACGTA CGTGGAGGCC ATACGGGAGA AAAGTTGTTC
ATGCAGCTGG TATGTGCCGT ATGCTGGTTC AACCCTTTCT TCTACCTGCT GAGAAAAGAA
CTGAGCATGG TACATGAATT CCTGGCTGAC AAAGCCGCTA CGGAAGACAG TGAGGCAGAA
GATTATGCCC GCACACTCCT GCAGGTAACC CTGCAAACCA GGTTGCCGCT GATGATTAAC
ACCTTCGGAC AAGCGCCTGT CAAACGTCGT ATACTCATGT TGTTTACCCA ACGTTCAAAT
TATTCACTCA TGAAAAGAAT CATCGTTATT CCACTCGTAC TGGGACTGGG CTTCGTTATC
GGTTGCCAGC GGGACCTGGA CCTGAACGCA AAAAATATTG TCGATGTGAC AAAATCAATT
GCTGTATCCC CGGCAGATCA TGAAGTATAT TCATTCGTCA GTGATCCTCC TACTTATCCT
GGTGGAATGG ACGCACTGTC AAAATACCTG GGCAGCAGCA TCAGATATCC CAAGAAAGCA
CAGGACCATG GCACAACGGG CACCATATTC GTCAGCTTTG TGATAGATTC AGAAGGAAAT
GTGAGCAACG CAAAAACAGT CGGCAATGTA CATGGTGACG GATTAGAAGA GGAGTCCATC
CGTGTGGTAT CTTCCATGCC CAAATGGAAT CCTGGTAAGC AGGATGGTCA GGCGGTGTCC
GTCGCTTTCA CGCTGCCTAT CAAATTTGTA CTTATGGACT AA
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| Protein sequence | MNAFLPYVIK MLLCSGILYG YYALVLKNNS FHRWNRAFIL LAVIASLLIP TLQFSMNTTP
ITSQQLNMIV VCGYVADNMQ KAGLDLTSWI PAGIYLFITL LLLANIASNW ILVKRLIRKG
EKTTFNGYQL IHHPQVKSTF SFFGSIFWAE EATKDSPEGR QILKHELEHV RGGHTGEKLF
MQLVCAVCWF NPFFYLLRKE LSMVHEFLAD KAATEDSEAE DYARTLLQVT LQTRLPLMIN
TFGQAPVKRR ILMLFTQRSN YSLMKRIIVI PLVLGLGFVI GCQRDLDLNA KNIVDVTKSI
AVSPADHEVY SFVSDPPTYP GGMDALSKYL GSSIRYPKKA QDHGTTGTIF VSFVIDSEGN
VSNAKTVGNV HGDGLEEESI RVVSSMPKWN PGKQDGQAVS VAFTLPIKFV LMD
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