| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6483 |
|---|
| Symbol | |
|---|
| ID | 8362667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 8144231 |
|---|
| End bp | 8144626 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644968611 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_003126088 |
|---|
| Protein GI | 256425435 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1607] Acyl-CoA hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.474329 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATACG AAAAACAGAT AGCCGAATCC GTTACACGGA TATTCAAAGC GGTATTTCCT
AACACAGTGA ACCATTATGA TACTTTATTT GGCGGTACAG CGATGCAGCT TATGGATGAA
GCAGCATTTA TAACAGCGAC CCGTTTCAGC CGTATGCGTA TGGTCACCGT GTCAAGTGAC
AAGATAGATT TTAAAATGGC GATCCCTCAT GGTACGATCA TAGAATTAGT AGGAACAGTC
GTACATGTAG GTACTACCAG TCTGAAAGTA GAGGTGGATA TTTTCGTGGA GCAGATGTAC
AATACACACC GGGAAAAGGC CATTTCAGGC TCCTTTACTT TTGTTGCGAT CGATGATCAG
AAACGTCCGA CAAAGATTGT ACTGACACAT GAATAA
|
|---|
| Protein sequence | MAYEKQIAES VTRIFKAVFP NTVNHYDTLF GGTAMQLMDE AAFITATRFS RMRMVTVSSD
KIDFKMAIPH GTIIELVGTV VHVGTTSLKV EVDIFVEQMY NTHREKAISG SFTFVAIDDQ
KRPTKIVLTH E
|
|---|
| |