Gene Cpin_6373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6373 
Symbol 
ID8362557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8014871 
End bp8015782 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content46% 
IMG OID644968501 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003125978 
Protein GI256425325 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACACG CAACAACTAC ACCGTCTGCT ACACAAGGCG TAGACATCAG CAATGTTGAG 
TATAAAACAC TGACTATCGA AGGACAGGAG ATTTTCTACC GTGAGGCAGG TTCGCCAAAG
AATCCGACCA TCCTGCTGCT GCATGGATAT CCGACTTCTT CCTTCATGTT CCGCAACCTC
ATTACAGCAT TGTCTGGAAA ATATCACCTG ATTGCTCCTG ACTATCCTGG TTTTGGTAAC
AGTAGTATGC CACTGGTGGC TGAATTCGAA TATACTTTCG ATCACCTGGC TGATATCGTA
GACCAGTTTA TTACGGCAAA GGGACTGACA AAATACAGTC TGTATGTAAT GGACTATGGC
GCACCTGTCG GTTATCGTAT TGCCACCAGA CACCCTGAAC GCGTACAGGC TTTACTCGTA
CAGAATGGTA ATGCATATGA AGAAGGTTTA TCTCCTTTCT GGGATCCTAT CAGGGCTTTC
TGGGCTGACC CGCAGAATGA AGCACACATC AATGGTATGA AAGCCACTTC ACAGCTGGAT
TTTACAAAAT GGCAGTACCT GACAGGTGTA AGAGACGCCG CTAAGATCAG TCCGGATACC
TGGGTACACG ATCAGAGTAA ACTGGACCGC CCCGGTAACG TAGACATACA ACTGGCTTTA
TTCTACTCTT ATAGCAGCAA TCCTAAACGC TATCCTGAAT GGCAGGAATT CTTCCGCAAA
TATCAGCCGC CAACCCTGAT CACCTGGGGC GCTAACGATG AAATCTTCCC TGCCAGTGGT
GCAAAAGCTT ATCTGAAAGA TCTGCCAGAT GCAGAATTAC ATTTACTGGA TACCGGTCAC
TTCGCACTGG AAGAAGATGG TACTGTGATC ACTTCCCTGA TCGATGATTT TCTGACAAGG
AATGTGAAAT AG
 
Protein sequence
MAHATTTPSA TQGVDISNVE YKTLTIEGQE IFYREAGSPK NPTILLLHGY PTSSFMFRNL 
ITALSGKYHL IAPDYPGFGN SSMPLVAEFE YTFDHLADIV DQFITAKGLT KYSLYVMDYG
APVGYRIATR HPERVQALLV QNGNAYEEGL SPFWDPIRAF WADPQNEAHI NGMKATSQLD
FTKWQYLTGV RDAAKISPDT WVHDQSKLDR PGNVDIQLAL FYSYSSNPKR YPEWQEFFRK
YQPPTLITWG ANDEIFPASG AKAYLKDLPD AELHLLDTGH FALEEDGTVI TSLIDDFLTR
NVK